Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24255 | 72988;72989;72990 | chr2:178573369;178573368;178573367 | chr2:179438096;179438095;179438094 |
N2AB | 22614 | 68065;68066;68067 | chr2:178573369;178573368;178573367 | chr2:179438096;179438095;179438094 |
N2A | 21687 | 65284;65285;65286 | chr2:178573369;178573368;178573367 | chr2:179438096;179438095;179438094 |
N2B | 15190 | 45793;45794;45795 | chr2:178573369;178573368;178573367 | chr2:179438096;179438095;179438094 |
Novex-1 | 15315 | 46168;46169;46170 | chr2:178573369;178573368;178573367 | chr2:179438096;179438095;179438094 |
Novex-2 | 15382 | 46369;46370;46371 | chr2:178573369;178573368;178573367 | chr2:179438096;179438095;179438094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.005 | N | 0.158 | 0.128 | 0.400033932507 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.137 | likely_benign | 0.1377 | benign | -1.226 | Destabilizing | 0.007 | N | 0.215 | neutral | None | None | None | None | I |
I/C | 0.364 | ambiguous | 0.3658 | ambiguous | -0.702 | Destabilizing | 0.356 | N | 0.323 | neutral | None | None | None | None | I |
I/D | 0.3415 | ambiguous | 0.373 | ambiguous | -0.869 | Destabilizing | 0.016 | N | 0.267 | neutral | None | None | None | None | I |
I/E | 0.2359 | likely_benign | 0.2639 | benign | -0.949 | Destabilizing | 0.031 | N | 0.265 | neutral | None | None | None | None | I |
I/F | 0.108 | likely_benign | 0.1133 | benign | -1.166 | Destabilizing | 0.106 | N | 0.327 | neutral | N | 0.47967367 | None | None | I |
I/G | 0.2654 | likely_benign | 0.27 | benign | -1.45 | Destabilizing | 0.031 | N | 0.285 | neutral | None | None | None | None | I |
I/H | 0.2038 | likely_benign | 0.2137 | benign | -0.693 | Destabilizing | 0.356 | N | 0.321 | neutral | None | None | None | None | I |
I/K | 0.1288 | likely_benign | 0.1362 | benign | -0.656 | Destabilizing | 0.031 | N | 0.297 | neutral | None | None | None | None | I |
I/L | 0.0711 | likely_benign | 0.0736 | benign | -0.729 | Destabilizing | 0.005 | N | 0.147 | neutral | N | 0.41398621 | None | None | I |
I/M | 0.0723 | likely_benign | 0.0739 | benign | -0.434 | Destabilizing | 0.295 | N | 0.325 | neutral | N | 0.518692232 | None | None | I |
I/N | 0.0917 | likely_benign | 0.097 | benign | -0.383 | Destabilizing | None | N | 0.231 | neutral | N | 0.488369325 | None | None | I |
I/P | 0.7036 | likely_pathogenic | 0.7238 | pathogenic | -0.862 | Destabilizing | 0.136 | N | 0.393 | neutral | None | None | None | None | I |
I/Q | 0.151 | likely_benign | 0.1654 | benign | -0.701 | Destabilizing | 0.136 | N | 0.386 | neutral | None | None | None | None | I |
I/R | 0.1103 | likely_benign | 0.1201 | benign | 0.011 | Stabilizing | 0.072 | N | 0.357 | neutral | None | None | None | None | I |
I/S | 0.0987 | likely_benign | 0.1015 | benign | -0.89 | Destabilizing | 0.005 | N | 0.231 | neutral | N | 0.41604508 | None | None | I |
I/T | 0.0706 | likely_benign | 0.072 | benign | -0.866 | Destabilizing | None | N | 0.153 | neutral | N | 0.376254541 | None | None | I |
I/V | 0.0678 | likely_benign | 0.0671 | benign | -0.862 | Destabilizing | 0.005 | N | 0.158 | neutral | N | 0.473053156 | None | None | I |
I/W | 0.5824 | likely_pathogenic | 0.5878 | pathogenic | -1.15 | Destabilizing | 0.864 | D | 0.32 | neutral | None | None | None | None | I |
I/Y | 0.3246 | likely_benign | 0.3386 | benign | -0.907 | Destabilizing | 0.356 | N | 0.406 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.