Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24259 | 73000;73001;73002 | chr2:178573357;178573356;178573355 | chr2:179438084;179438083;179438082 |
N2AB | 22618 | 68077;68078;68079 | chr2:178573357;178573356;178573355 | chr2:179438084;179438083;179438082 |
N2A | 21691 | 65296;65297;65298 | chr2:178573357;178573356;178573355 | chr2:179438084;179438083;179438082 |
N2B | 15194 | 45805;45806;45807 | chr2:178573357;178573356;178573355 | chr2:179438084;179438083;179438082 |
Novex-1 | 15319 | 46180;46181;46182 | chr2:178573357;178573356;178573355 | chr2:179438084;179438083;179438082 |
Novex-2 | 15386 | 46381;46382;46383 | chr2:178573357;178573356;178573355 | chr2:179438084;179438083;179438082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.9 | N | 0.301 | 0.234 | 0.63781096912 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6107 | likely_pathogenic | 0.5614 | ambiguous | -2.501 | Highly Destabilizing | 0.948 | D | 0.578 | neutral | D | 0.544604358 | None | None | N |
V/C | 0.9363 | likely_pathogenic | 0.9169 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9978 | likely_pathogenic | 0.9972 | pathogenic | -3.447 | Highly Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
V/E | 0.9921 | likely_pathogenic | 0.9902 | pathogenic | -3.135 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.556885716 | None | None | N |
V/F | 0.8211 | likely_pathogenic | 0.7909 | pathogenic | -1.472 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | N |
V/G | 0.8917 | likely_pathogenic | 0.8652 | pathogenic | -3.064 | Highly Destabilizing | 0.999 | D | 0.862 | deleterious | D | 0.556885716 | None | None | N |
V/H | 0.9974 | likely_pathogenic | 0.9965 | pathogenic | -2.943 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.0771 | likely_benign | 0.0772 | benign | -0.836 | Destabilizing | 0.246 | N | 0.18 | neutral | None | None | None | None | N |
V/K | 0.9935 | likely_pathogenic | 0.9921 | pathogenic | -2.07 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
V/L | 0.2248 | likely_benign | 0.2085 | benign | -0.836 | Destabilizing | 0.9 | D | 0.301 | neutral | N | 0.470274715 | None | None | N |
V/M | 0.4557 | ambiguous | 0.4161 | ambiguous | -1.074 | Destabilizing | 0.997 | D | 0.627 | neutral | N | 0.512928525 | None | None | N |
V/N | 0.9923 | likely_pathogenic | 0.9894 | pathogenic | -2.788 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
V/P | 0.9697 | likely_pathogenic | 0.971 | pathogenic | -1.378 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
V/Q | 0.9897 | likely_pathogenic | 0.9863 | pathogenic | -2.423 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
V/R | 0.9886 | likely_pathogenic | 0.9853 | pathogenic | -2.166 | Highly Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.9505 | likely_pathogenic | 0.9343 | pathogenic | -3.201 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
V/T | 0.761 | likely_pathogenic | 0.744 | pathogenic | -2.744 | Highly Destabilizing | 0.992 | D | 0.584 | neutral | None | None | None | None | N |
V/W | 0.9964 | likely_pathogenic | 0.9955 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/Y | 0.9891 | likely_pathogenic | 0.986 | pathogenic | -1.749 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.