Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2426 | 7501;7502;7503 | chr2:178773892;178773891;178773890 | chr2:179638619;179638618;179638617 |
N2AB | 2426 | 7501;7502;7503 | chr2:178773892;178773891;178773890 | chr2:179638619;179638618;179638617 |
N2A | 2426 | 7501;7502;7503 | chr2:178773892;178773891;178773890 | chr2:179638619;179638618;179638617 |
N2B | 2380 | 7363;7364;7365 | chr2:178773892;178773891;178773890 | chr2:179638619;179638618;179638617 |
Novex-1 | 2380 | 7363;7364;7365 | chr2:178773892;178773891;178773890 | chr2:179638619;179638618;179638617 |
Novex-2 | 2380 | 7363;7364;7365 | chr2:178773892;178773891;178773890 | chr2:179638619;179638618;179638617 |
Novex-3 | 2426 | 7501;7502;7503 | chr2:178773892;178773891;178773890 | chr2:179638619;179638618;179638617 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | D | 0.819 | 0.642 | 0.811379597274 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0992 | likely_benign | 0.0958 | benign | -1.14 | Destabilizing | 0.997 | D | 0.488 | neutral | D | 0.584443812 | None | None | N |
S/C | 0.1099 | likely_benign | 0.1078 | benign | -1.054 | Destabilizing | 1.0 | D | 0.819 | deleterious | D | 0.693857774 | None | None | N |
S/D | 0.562 | ambiguous | 0.5363 | ambiguous | -1.218 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
S/E | 0.623 | likely_pathogenic | 0.6072 | pathogenic | -1.057 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
S/F | 0.2186 | likely_benign | 0.2074 | benign | -1.358 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.695335063 | None | None | N |
S/G | 0.1523 | likely_benign | 0.1432 | benign | -1.469 | Destabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | N |
S/H | 0.3474 | ambiguous | 0.3326 | benign | -1.769 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
S/I | 0.1846 | likely_benign | 0.1734 | benign | -0.312 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
S/K | 0.7451 | likely_pathogenic | 0.7161 | pathogenic | -0.179 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
S/L | 0.1163 | likely_benign | 0.1118 | benign | -0.312 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
S/M | 0.2213 | likely_benign | 0.2106 | benign | -0.265 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
S/N | 0.2031 | likely_benign | 0.1908 | benign | -0.801 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
S/P | 0.9799 | likely_pathogenic | 0.9808 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.693857774 | None | None | N |
S/Q | 0.5383 | ambiguous | 0.5173 | ambiguous | -0.714 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/R | 0.6079 | likely_pathogenic | 0.5722 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
S/T | 0.0753 | likely_benign | 0.0738 | benign | -0.64 | Destabilizing | 0.999 | D | 0.503 | neutral | N | 0.517717318 | None | None | N |
S/V | 0.1837 | likely_benign | 0.1729 | benign | -0.558 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
S/W | 0.4667 | ambiguous | 0.45 | ambiguous | -1.413 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
S/Y | 0.2165 | likely_benign | 0.2104 | benign | -1.024 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.635839721 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.