Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24264 | 73015;73016;73017 | chr2:178573342;178573341;178573340 | chr2:179438069;179438068;179438067 |
N2AB | 22623 | 68092;68093;68094 | chr2:178573342;178573341;178573340 | chr2:179438069;179438068;179438067 |
N2A | 21696 | 65311;65312;65313 | chr2:178573342;178573341;178573340 | chr2:179438069;179438068;179438067 |
N2B | 15199 | 45820;45821;45822 | chr2:178573342;178573341;178573340 | chr2:179438069;179438068;179438067 |
Novex-1 | 15324 | 46195;46196;46197 | chr2:178573342;178573341;178573340 | chr2:179438069;179438068;179438067 |
Novex-2 | 15391 | 46396;46397;46398 | chr2:178573342;178573341;178573340 | chr2:179438069;179438068;179438067 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs745449959 | 0.54 | 0.018 | N | 0.488 | 0.226 | 0.345859378078 | gnomAD-2.1.1 | 5.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.09E-05 | 0 |
K/I | rs745449959 | 0.54 | 0.018 | N | 0.488 | 0.226 | 0.345859378078 | gnomAD-4.0.0 | 7.18776E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.27754E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5631 | ambiguous | 0.5121 | ambiguous | -0.559 | Destabilizing | 0.775 | D | 0.513 | neutral | None | None | None | None | N |
K/C | 0.7908 | likely_pathogenic | 0.7869 | pathogenic | -0.568 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/D | 0.9048 | likely_pathogenic | 0.8692 | pathogenic | -0.036 | Destabilizing | 0.923 | D | 0.527 | neutral | None | None | None | None | N |
K/E | 0.4212 | ambiguous | 0.3454 | ambiguous | 0.061 | Stabilizing | 0.722 | D | 0.463 | neutral | N | 0.47102639 | None | None | N |
K/F | 0.8969 | likely_pathogenic | 0.864 | pathogenic | -0.312 | Destabilizing | 0.923 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/G | 0.6924 | likely_pathogenic | 0.6359 | pathogenic | -0.899 | Destabilizing | 0.923 | D | 0.583 | neutral | None | None | None | None | N |
K/H | 0.4663 | ambiguous | 0.431 | ambiguous | -1.156 | Destabilizing | 0.989 | D | 0.544 | neutral | None | None | None | None | N |
K/I | 0.5252 | ambiguous | 0.4815 | ambiguous | 0.309 | Stabilizing | 0.018 | N | 0.488 | neutral | N | 0.467623029 | None | None | N |
K/L | 0.5479 | ambiguous | 0.5067 | ambiguous | 0.309 | Stabilizing | 0.372 | N | 0.59 | neutral | None | None | None | None | N |
K/M | 0.3849 | ambiguous | 0.344 | ambiguous | 0.112 | Stabilizing | 0.979 | D | 0.544 | neutral | None | None | None | None | N |
K/N | 0.8041 | likely_pathogenic | 0.7383 | pathogenic | -0.387 | Destabilizing | 0.901 | D | 0.455 | neutral | N | 0.475789784 | None | None | N |
K/P | 0.9381 | likely_pathogenic | 0.916 | pathogenic | 0.05 | Stabilizing | 0.961 | D | 0.549 | neutral | None | None | None | None | N |
K/Q | 0.2114 | likely_benign | 0.1873 | benign | -0.453 | Destabilizing | 0.901 | D | 0.493 | neutral | N | 0.49945022 | None | None | N |
K/R | 0.0748 | likely_benign | 0.0717 | benign | -0.495 | Destabilizing | 0.008 | N | 0.198 | neutral | N | 0.485158449 | None | None | N |
K/S | 0.711 | likely_pathogenic | 0.6515 | pathogenic | -1.026 | Destabilizing | 0.775 | D | 0.47 | neutral | None | None | None | None | N |
K/T | 0.441 | ambiguous | 0.3935 | ambiguous | -0.725 | Destabilizing | 0.722 | D | 0.498 | neutral | N | 0.505859008 | None | None | N |
K/V | 0.4867 | ambiguous | 0.4645 | ambiguous | 0.05 | Stabilizing | 0.372 | N | 0.597 | neutral | None | None | None | None | N |
K/W | 0.8655 | likely_pathogenic | 0.8433 | pathogenic | -0.194 | Destabilizing | 0.996 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/Y | 0.8002 | likely_pathogenic | 0.7613 | pathogenic | 0.087 | Stabilizing | 0.961 | D | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.