Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24283 | 73072;73073;73074 | chr2:178573285;178573284;178573283 | chr2:179438012;179438011;179438010 |
N2AB | 22642 | 68149;68150;68151 | chr2:178573285;178573284;178573283 | chr2:179438012;179438011;179438010 |
N2A | 21715 | 65368;65369;65370 | chr2:178573285;178573284;178573283 | chr2:179438012;179438011;179438010 |
N2B | 15218 | 45877;45878;45879 | chr2:178573285;178573284;178573283 | chr2:179438012;179438011;179438010 |
Novex-1 | 15343 | 46252;46253;46254 | chr2:178573285;178573284;178573283 | chr2:179438012;179438011;179438010 |
Novex-2 | 15410 | 46453;46454;46455 | chr2:178573285;178573284;178573283 | chr2:179438012;179438011;179438010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.967 | N | 0.641 | 0.19 | 0.247322355667 | gnomAD-4.0.0 | 1.64151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.93474E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8318 | likely_pathogenic | 0.8501 | pathogenic | -0.456 | Destabilizing | 0.916 | D | 0.61 | neutral | None | None | None | None | N |
K/C | 0.8852 | likely_pathogenic | 0.9089 | pathogenic | -0.538 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
K/D | 0.9572 | likely_pathogenic | 0.9604 | pathogenic | 0.326 | Stabilizing | 0.987 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/E | 0.7123 | likely_pathogenic | 0.7452 | pathogenic | 0.397 | Stabilizing | 0.892 | D | 0.53 | neutral | N | 0.494391221 | None | None | N |
K/F | 0.9605 | likely_pathogenic | 0.9624 | pathogenic | -0.426 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/G | 0.9138 | likely_pathogenic | 0.9252 | pathogenic | -0.743 | Destabilizing | 0.975 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/H | 0.5306 | ambiguous | 0.5639 | ambiguous | -1.018 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/I | 0.7335 | likely_pathogenic | 0.7517 | pathogenic | 0.249 | Stabilizing | 0.983 | D | 0.735 | prob.delet. | N | 0.475963914 | None | None | N |
K/L | 0.7291 | likely_pathogenic | 0.76 | pathogenic | 0.249 | Stabilizing | 0.975 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/M | 0.6167 | likely_pathogenic | 0.6513 | pathogenic | 0.088 | Stabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/N | 0.9127 | likely_pathogenic | 0.918 | pathogenic | -0.135 | Destabilizing | 0.967 | D | 0.641 | neutral | N | 0.514574492 | None | None | N |
K/P | 0.9302 | likely_pathogenic | 0.9477 | pathogenic | 0.044 | Stabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/Q | 0.3784 | ambiguous | 0.4202 | ambiguous | -0.237 | Destabilizing | 0.967 | D | 0.633 | neutral | N | 0.49167899 | None | None | N |
K/R | 0.0813 | likely_benign | 0.0854 | benign | -0.278 | Destabilizing | 0.025 | N | 0.251 | neutral | N | 0.420106893 | None | None | N |
K/S | 0.8931 | likely_pathogenic | 0.9051 | pathogenic | -0.823 | Destabilizing | 0.916 | D | 0.589 | neutral | None | None | None | None | N |
K/T | 0.5737 | likely_pathogenic | 0.6184 | pathogenic | -0.557 | Destabilizing | 0.967 | D | 0.715 | prob.delet. | N | 0.456214048 | None | None | N |
K/V | 0.6809 | likely_pathogenic | 0.7074 | pathogenic | 0.044 | Stabilizing | 0.987 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/W | 0.917 | likely_pathogenic | 0.9304 | pathogenic | -0.313 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
K/Y | 0.8861 | likely_pathogenic | 0.8914 | pathogenic | -0.001 | Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.