Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24285 | 73078;73079;73080 | chr2:178573279;178573278;178573277 | chr2:179438006;179438005;179438004 |
N2AB | 22644 | 68155;68156;68157 | chr2:178573279;178573278;178573277 | chr2:179438006;179438005;179438004 |
N2A | 21717 | 65374;65375;65376 | chr2:178573279;178573278;178573277 | chr2:179438006;179438005;179438004 |
N2B | 15220 | 45883;45884;45885 | chr2:178573279;178573278;178573277 | chr2:179438006;179438005;179438004 |
Novex-1 | 15345 | 46258;46259;46260 | chr2:178573279;178573278;178573277 | chr2:179438006;179438005;179438004 |
Novex-2 | 15412 | 46459;46460;46461 | chr2:178573279;178573278;178573277 | chr2:179438006;179438005;179438004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.983 | N | 0.771 | 0.476 | 0.715032251236 | gnomAD-4.0.0 | 6.9043E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.04819E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0725 | likely_benign | 0.0681 | benign | -0.595 | Destabilizing | 0.63 | D | 0.39 | neutral | N | 0.514249205 | None | None | N |
S/C | 0.098 | likely_benign | 0.0949 | benign | -0.333 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | N | 0.475157901 | None | None | N |
S/D | 0.629 | likely_pathogenic | 0.5862 | pathogenic | -0.006 | Destabilizing | 0.916 | D | 0.513 | neutral | None | None | None | None | N |
S/E | 0.7063 | likely_pathogenic | 0.6786 | pathogenic | -0.077 | Destabilizing | 0.916 | D | 0.518 | neutral | None | None | None | None | N |
S/F | 0.1936 | likely_benign | 0.182 | benign | -1.035 | Destabilizing | 0.983 | D | 0.771 | deleterious | N | 0.485753738 | None | None | N |
S/G | 0.0816 | likely_benign | 0.0786 | benign | -0.756 | Destabilizing | 0.916 | D | 0.449 | neutral | None | None | None | None | N |
S/H | 0.4004 | ambiguous | 0.3819 | ambiguous | -1.233 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/I | 0.1521 | likely_benign | 0.1409 | benign | -0.29 | Destabilizing | 0.975 | D | 0.752 | deleterious | None | None | None | None | N |
S/K | 0.7518 | likely_pathogenic | 0.7283 | pathogenic | -0.652 | Destabilizing | 0.916 | D | 0.515 | neutral | None | None | None | None | N |
S/L | 0.0808 | likely_benign | 0.079 | benign | -0.29 | Destabilizing | 0.845 | D | 0.623 | neutral | None | None | None | None | N |
S/M | 0.1424 | likely_benign | 0.1437 | benign | 0.054 | Stabilizing | 0.997 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/N | 0.1442 | likely_benign | 0.1337 | benign | -0.386 | Destabilizing | 0.916 | D | 0.517 | neutral | None | None | None | None | N |
S/P | 0.1368 | likely_benign | 0.1372 | benign | -0.361 | Destabilizing | 0.983 | D | 0.74 | deleterious | N | 0.493700574 | None | None | N |
S/Q | 0.5366 | ambiguous | 0.5176 | ambiguous | -0.633 | Destabilizing | 0.987 | D | 0.617 | neutral | None | None | None | None | N |
S/R | 0.7186 | likely_pathogenic | 0.6931 | pathogenic | -0.42 | Destabilizing | 0.975 | D | 0.745 | deleterious | None | None | None | None | N |
S/T | 0.058 | likely_benign | 0.0603 | benign | -0.489 | Destabilizing | 0.011 | N | 0.221 | neutral | N | 0.379585635 | None | None | N |
S/V | 0.1489 | likely_benign | 0.1407 | benign | -0.361 | Destabilizing | 0.845 | D | 0.633 | neutral | None | None | None | None | N |
S/W | 0.3596 | ambiguous | 0.3535 | ambiguous | -0.997 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/Y | 0.2052 | likely_benign | 0.1941 | benign | -0.75 | Destabilizing | 0.994 | D | 0.763 | deleterious | N | 0.486007227 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.