Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24298 | 73117;73118;73119 | chr2:178573240;178573239;178573238 | chr2:179437967;179437966;179437965 |
N2AB | 22657 | 68194;68195;68196 | chr2:178573240;178573239;178573238 | chr2:179437967;179437966;179437965 |
N2A | 21730 | 65413;65414;65415 | chr2:178573240;178573239;178573238 | chr2:179437967;179437966;179437965 |
N2B | 15233 | 45922;45923;45924 | chr2:178573240;178573239;178573238 | chr2:179437967;179437966;179437965 |
Novex-1 | 15358 | 46297;46298;46299 | chr2:178573240;178573239;178573238 | chr2:179437967;179437966;179437965 |
Novex-2 | 15425 | 46498;46499;46500 | chr2:178573240;178573239;178573238 | chr2:179437967;179437966;179437965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.003 | N | 0.294 | 0.119 | 0.358948522604 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2918 | likely_benign | 0.2265 | benign | -2.395 | Highly Destabilizing | 0.063 | N | 0.527 | neutral | None | None | None | None | N |
M/C | 0.5463 | ambiguous | 0.5262 | ambiguous | -2.374 | Highly Destabilizing | 0.942 | D | 0.653 | neutral | None | None | None | None | N |
M/D | 0.919 | likely_pathogenic | 0.8707 | pathogenic | -2.396 | Highly Destabilizing | 0.428 | N | 0.689 | prob.neutral | None | None | None | None | N |
M/E | 0.6208 | likely_pathogenic | 0.5459 | ambiguous | -2.227 | Highly Destabilizing | 0.134 | N | 0.639 | neutral | None | None | None | None | N |
M/F | 0.2784 | likely_benign | 0.2443 | benign | -0.925 | Destabilizing | 0.001 | N | 0.218 | neutral | None | None | None | None | N |
M/G | 0.6351 | likely_pathogenic | 0.5351 | ambiguous | -2.791 | Highly Destabilizing | 0.134 | N | 0.643 | neutral | None | None | None | None | N |
M/H | 0.4468 | ambiguous | 0.4013 | ambiguous | -2.297 | Highly Destabilizing | 0.942 | D | 0.644 | neutral | None | None | None | None | N |
M/I | 0.3911 | ambiguous | 0.3053 | benign | -1.272 | Destabilizing | 0.003 | N | 0.294 | neutral | N | 0.433457405 | None | None | N |
M/K | 0.1713 | likely_benign | 0.1586 | benign | -1.698 | Destabilizing | 0.001 | N | 0.418 | neutral | N | 0.406924165 | None | None | N |
M/L | 0.1428 | likely_benign | 0.1257 | benign | -1.272 | Destabilizing | None | N | 0.223 | neutral | N | 0.424395205 | None | None | N |
M/N | 0.5652 | likely_pathogenic | 0.463 | ambiguous | -1.896 | Destabilizing | 0.428 | N | 0.681 | prob.neutral | None | None | None | None | N |
M/P | 0.992 | likely_pathogenic | 0.9836 | pathogenic | -1.629 | Destabilizing | 0.603 | D | 0.663 | neutral | None | None | None | None | N |
M/Q | 0.235 | likely_benign | 0.2181 | benign | -1.725 | Destabilizing | 0.428 | N | 0.625 | neutral | None | None | None | None | N |
M/R | 0.2005 | likely_benign | 0.1759 | benign | -1.564 | Destabilizing | 0.22 | N | 0.683 | prob.neutral | N | 0.406750807 | None | None | N |
M/S | 0.2601 | likely_benign | 0.2114 | benign | -2.425 | Highly Destabilizing | 0.004 | N | 0.382 | neutral | None | None | None | None | N |
M/T | 0.134 | likely_benign | 0.1096 | benign | -2.156 | Highly Destabilizing | 0.001 | N | 0.373 | neutral | N | 0.386434249 | None | None | N |
M/V | 0.1191 | likely_benign | 0.103 | benign | -1.629 | Destabilizing | 0.022 | N | 0.513 | neutral | N | 0.443442325 | None | None | N |
M/W | 0.6285 | likely_pathogenic | 0.5741 | pathogenic | -1.215 | Destabilizing | 0.942 | D | 0.652 | neutral | None | None | None | None | N |
M/Y | 0.5022 | ambiguous | 0.4552 | ambiguous | -1.23 | Destabilizing | 0.273 | N | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.