Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24348 | 73267;73268;73269 | chr2:178573090;178573089;178573088 | chr2:179437817;179437816;179437815 |
N2AB | 22707 | 68344;68345;68346 | chr2:178573090;178573089;178573088 | chr2:179437817;179437816;179437815 |
N2A | 21780 | 65563;65564;65565 | chr2:178573090;178573089;178573088 | chr2:179437817;179437816;179437815 |
N2B | 15283 | 46072;46073;46074 | chr2:178573090;178573089;178573088 | chr2:179437817;179437816;179437815 |
Novex-1 | 15408 | 46447;46448;46449 | chr2:178573090;178573089;178573088 | chr2:179437817;179437816;179437815 |
Novex-2 | 15475 | 46648;46649;46650 | chr2:178573090;178573089;178573088 | chr2:179437817;179437816;179437815 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1708838358 | None | 0.003 | N | 0.125 | 0.098 | 0.307016933798 | gnomAD-4.0.0 | 1.36885E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79927E-06 | 0 | 0 |
I/S | rs1708837698 | None | 0.884 | N | 0.435 | 0.383 | 0.633100741311 | gnomAD-4.0.0 | 1.59241E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85994E-06 | 0 | 0 |
I/V | None | None | 0.001 | N | 0.121 | 0.062 | 0.342865806769 | gnomAD-4.0.0 | 1.36885E-06 | None | None | None | None | I | None | 2.99007E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99637E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4725 | ambiguous | 0.4991 | ambiguous | -0.471 | Destabilizing | 0.373 | N | 0.431 | neutral | None | None | None | None | I |
I/C | 0.8142 | likely_pathogenic | 0.8265 | pathogenic | -0.775 | Destabilizing | 0.996 | D | 0.415 | neutral | None | None | None | None | I |
I/D | 0.9132 | likely_pathogenic | 0.9251 | pathogenic | -0.349 | Destabilizing | 0.984 | D | 0.447 | neutral | None | None | None | None | I |
I/E | 0.8787 | likely_pathogenic | 0.8939 | pathogenic | -0.442 | Destabilizing | 0.953 | D | 0.433 | neutral | None | None | None | None | I |
I/F | 0.3311 | likely_benign | 0.3429 | ambiguous | -0.621 | Destabilizing | 0.884 | D | 0.401 | neutral | N | 0.492458326 | None | None | I |
I/G | 0.8115 | likely_pathogenic | 0.8222 | pathogenic | -0.574 | Destabilizing | 0.953 | D | 0.405 | neutral | None | None | None | None | I |
I/H | 0.7703 | likely_pathogenic | 0.8001 | pathogenic | 0.077 | Stabilizing | 0.996 | D | 0.406 | neutral | None | None | None | None | I |
I/K | 0.796 | likely_pathogenic | 0.8285 | pathogenic | -0.38 | Destabilizing | 0.953 | D | 0.423 | neutral | None | None | None | None | I |
I/L | 0.1383 | likely_benign | 0.129 | benign | -0.321 | Destabilizing | 0.003 | N | 0.125 | neutral | N | 0.464972391 | None | None | I |
I/M | 0.1805 | likely_benign | 0.1783 | benign | -0.613 | Destabilizing | 0.884 | D | 0.464 | neutral | N | 0.472746512 | None | None | I |
I/N | 0.567 | likely_pathogenic | 0.6177 | pathogenic | -0.249 | Destabilizing | 0.979 | D | 0.437 | neutral | N | 0.495852658 | None | None | I |
I/P | 0.7884 | likely_pathogenic | 0.7994 | pathogenic | -0.343 | Destabilizing | 0.984 | D | 0.445 | neutral | None | None | None | None | I |
I/Q | 0.7447 | likely_pathogenic | 0.7869 | pathogenic | -0.44 | Destabilizing | 0.984 | D | 0.422 | neutral | None | None | None | None | I |
I/R | 0.6655 | likely_pathogenic | 0.7203 | pathogenic | 0.106 | Stabilizing | 0.953 | D | 0.437 | neutral | None | None | None | None | I |
I/S | 0.5353 | ambiguous | 0.5653 | pathogenic | -0.605 | Destabilizing | 0.884 | D | 0.435 | neutral | N | 0.4731678 | None | None | I |
I/T | 0.5385 | ambiguous | 0.5725 | pathogenic | -0.6 | Destabilizing | 0.684 | D | 0.472 | neutral | N | 0.467607264 | None | None | I |
I/V | 0.0755 | likely_benign | 0.0763 | benign | -0.343 | Destabilizing | 0.001 | N | 0.121 | neutral | N | 0.466569901 | None | None | I |
I/W | 0.9166 | likely_pathogenic | 0.9257 | pathogenic | -0.642 | Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | I |
I/Y | 0.7413 | likely_pathogenic | 0.7486 | pathogenic | -0.41 | Destabilizing | 0.953 | D | 0.431 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.