Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24349 | 73270;73271;73272 | chr2:178573087;178573086;178573085 | chr2:179437814;179437813;179437812 |
N2AB | 22708 | 68347;68348;68349 | chr2:178573087;178573086;178573085 | chr2:179437814;179437813;179437812 |
N2A | 21781 | 65566;65567;65568 | chr2:178573087;178573086;178573085 | chr2:179437814;179437813;179437812 |
N2B | 15284 | 46075;46076;46077 | chr2:178573087;178573086;178573085 | chr2:179437814;179437813;179437812 |
Novex-1 | 15409 | 46450;46451;46452 | chr2:178573087;178573086;178573085 | chr2:179437814;179437813;179437812 |
Novex-2 | 15476 | 46651;46652;46653 | chr2:178573087;178573086;178573085 | chr2:179437814;179437813;179437812 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.997 | N | 0.684 | 0.468 | 0.404870348458 | gnomAD-4.0.0 | 1.36884E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79928E-06 | 0 | 0 |
Y/N | rs1559421745 | None | 0.942 | N | 0.527 | 0.316 | 0.412328234245 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/N | rs1559421745 | None | 0.942 | N | 0.527 | 0.316 | 0.412328234245 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9234 | likely_pathogenic | 0.9137 | pathogenic | -0.792 | Destabilizing | 0.754 | D | 0.567 | neutral | None | None | None | None | I |
Y/C | 0.6067 | likely_pathogenic | 0.5633 | ambiguous | 0.075 | Stabilizing | 0.997 | D | 0.684 | prob.neutral | N | 0.487140911 | None | None | I |
Y/D | 0.8781 | likely_pathogenic | 0.8496 | pathogenic | 0.977 | Stabilizing | 0.942 | D | 0.594 | neutral | N | 0.471425856 | None | None | I |
Y/E | 0.9714 | likely_pathogenic | 0.9672 | pathogenic | 0.96 | Stabilizing | 0.956 | D | 0.523 | neutral | None | None | None | None | I |
Y/F | 0.2578 | likely_benign | 0.2537 | benign | -0.405 | Destabilizing | 0.904 | D | 0.502 | neutral | N | 0.512947191 | None | None | I |
Y/G | 0.8782 | likely_pathogenic | 0.8606 | pathogenic | -0.983 | Destabilizing | 0.754 | D | 0.559 | neutral | None | None | None | None | I |
Y/H | 0.7355 | likely_pathogenic | 0.7229 | pathogenic | 0.153 | Stabilizing | 0.032 | N | 0.229 | neutral | N | 0.511061679 | None | None | I |
Y/I | 0.9171 | likely_pathogenic | 0.9065 | pathogenic | -0.313 | Destabilizing | 0.978 | D | 0.567 | neutral | None | None | None | None | I |
Y/K | 0.9582 | likely_pathogenic | 0.9517 | pathogenic | 0.179 | Stabilizing | 0.956 | D | 0.521 | neutral | None | None | None | None | I |
Y/L | 0.8556 | likely_pathogenic | 0.828 | pathogenic | -0.313 | Destabilizing | 0.86 | D | 0.567 | neutral | None | None | None | None | I |
Y/M | 0.9283 | likely_pathogenic | 0.9081 | pathogenic | -0.098 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | I |
Y/N | 0.7557 | likely_pathogenic | 0.6942 | pathogenic | 0.012 | Stabilizing | 0.942 | D | 0.527 | neutral | N | 0.478218542 | None | None | I |
Y/P | 0.9859 | likely_pathogenic | 0.9887 | pathogenic | -0.453 | Destabilizing | 0.978 | D | 0.675 | prob.neutral | None | None | None | None | I |
Y/Q | 0.9478 | likely_pathogenic | 0.94 | pathogenic | 0.035 | Stabilizing | 0.956 | D | 0.571 | neutral | None | None | None | None | I |
Y/R | 0.8793 | likely_pathogenic | 0.8721 | pathogenic | 0.478 | Stabilizing | 0.956 | D | 0.647 | neutral | None | None | None | None | I |
Y/S | 0.7091 | likely_pathogenic | 0.6638 | pathogenic | -0.47 | Destabilizing | 0.125 | N | 0.387 | neutral | N | 0.472946008 | None | None | I |
Y/T | 0.8944 | likely_pathogenic | 0.8758 | pathogenic | -0.398 | Destabilizing | 0.915 | D | 0.525 | neutral | None | None | None | None | I |
Y/V | 0.8547 | likely_pathogenic | 0.8362 | pathogenic | -0.453 | Destabilizing | 0.956 | D | 0.515 | neutral | None | None | None | None | I |
Y/W | 0.6625 | likely_pathogenic | 0.706 | pathogenic | -0.481 | Destabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.