Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24365 | 73318;73319;73320 | chr2:178573039;178573038;178573037 | chr2:179437766;179437765;179437764 |
N2AB | 22724 | 68395;68396;68397 | chr2:178573039;178573038;178573037 | chr2:179437766;179437765;179437764 |
N2A | 21797 | 65614;65615;65616 | chr2:178573039;178573038;178573037 | chr2:179437766;179437765;179437764 |
N2B | 15300 | 46123;46124;46125 | chr2:178573039;178573038;178573037 | chr2:179437766;179437765;179437764 |
Novex-1 | 15425 | 46498;46499;46500 | chr2:178573039;178573038;178573037 | chr2:179437766;179437765;179437764 |
Novex-2 | 15492 | 46699;46700;46701 | chr2:178573039;178573038;178573037 | chr2:179437766;179437765;179437764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.805 | N | 0.521 | 0.271 | 0.285316908763 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21507E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0859 | likely_benign | 0.0838 | benign | -1.333 | Destabilizing | 0.025 | N | 0.382 | neutral | N | 0.393514937 | None | None | N |
P/C | 0.5286 | ambiguous | 0.506 | ambiguous | -0.766 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
P/D | 0.5496 | ambiguous | 0.5272 | ambiguous | -1.286 | Destabilizing | 0.975 | D | 0.553 | neutral | None | None | None | None | N |
P/E | 0.3129 | likely_benign | 0.305 | benign | -1.339 | Destabilizing | 0.975 | D | 0.533 | neutral | None | None | None | None | N |
P/F | 0.6197 | likely_pathogenic | 0.5649 | pathogenic | -1.191 | Destabilizing | 0.987 | D | 0.724 | prob.delet. | None | None | None | None | N |
P/G | 0.3219 | likely_benign | 0.3079 | benign | -1.594 | Destabilizing | 0.845 | D | 0.585 | neutral | None | None | None | None | N |
P/H | 0.3059 | likely_benign | 0.2845 | benign | -1.152 | Destabilizing | 0.154 | N | 0.537 | neutral | None | None | None | None | N |
P/I | 0.3143 | likely_benign | 0.2941 | benign | -0.738 | Destabilizing | 0.975 | D | 0.732 | prob.delet. | None | None | None | None | N |
P/K | 0.3096 | likely_benign | 0.3109 | benign | -1.183 | Destabilizing | 0.975 | D | 0.537 | neutral | None | None | None | None | N |
P/L | 0.1233 | likely_benign | 0.1141 | benign | -0.738 | Destabilizing | 0.967 | D | 0.676 | prob.neutral | N | 0.465415108 | None | None | N |
P/M | 0.3359 | likely_benign | 0.3101 | benign | -0.451 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
P/N | 0.4093 | ambiguous | 0.4 | ambiguous | -0.847 | Destabilizing | 0.975 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/Q | 0.2175 | likely_benign | 0.2027 | benign | -1.095 | Destabilizing | 0.967 | D | 0.604 | neutral | N | 0.477978974 | None | None | N |
P/R | 0.2442 | likely_benign | 0.2309 | benign | -0.558 | Destabilizing | 0.967 | D | 0.683 | prob.neutral | N | 0.478499049 | None | None | N |
P/S | 0.1606 | likely_benign | 0.1508 | benign | -1.271 | Destabilizing | 0.805 | D | 0.521 | neutral | N | 0.451869808 | None | None | N |
P/T | 0.1238 | likely_benign | 0.1151 | benign | -1.229 | Destabilizing | 0.967 | D | 0.525 | neutral | N | 0.462201445 | None | None | N |
P/V | 0.2008 | likely_benign | 0.1905 | benign | -0.902 | Destabilizing | 0.95 | D | 0.605 | neutral | None | None | None | None | N |
P/W | 0.7521 | likely_pathogenic | 0.7117 | pathogenic | -1.337 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/Y | 0.5924 | likely_pathogenic | 0.5577 | ambiguous | -1.079 | Destabilizing | 0.95 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.