Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24367 | 73324;73325;73326 | chr2:178573033;178573032;178573031 | chr2:179437760;179437759;179437758 |
N2AB | 22726 | 68401;68402;68403 | chr2:178573033;178573032;178573031 | chr2:179437760;179437759;179437758 |
N2A | 21799 | 65620;65621;65622 | chr2:178573033;178573032;178573031 | chr2:179437760;179437759;179437758 |
N2B | 15302 | 46129;46130;46131 | chr2:178573033;178573032;178573031 | chr2:179437760;179437759;179437758 |
Novex-1 | 15427 | 46504;46505;46506 | chr2:178573033;178573032;178573031 | chr2:179437760;179437759;179437758 |
Novex-2 | 15494 | 46705;46706;46707 | chr2:178573033;178573032;178573031 | chr2:179437760;179437759;179437758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.058 | N | 0.298 | 0.137 | 0.19670166235 | gnomAD-4.0.0 | 6.84487E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99675E-07 | 0 | 0 |
E/D | rs1357419691 | -0.413 | 0.822 | N | 0.317 | 0.086 | 0.290590437066 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/D | rs1357419691 | -0.413 | 0.822 | N | 0.317 | 0.086 | 0.290590437066 | gnomAD-4.0.0 | 3.18567E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 3.02737E-05 |
E/V | None | None | 0.698 | N | 0.382 | 0.248 | 0.352262096564 | gnomAD-4.0.0 | 1.36897E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79935E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1018 | likely_benign | 0.1027 | benign | -0.421 | Destabilizing | 0.058 | N | 0.298 | neutral | N | 0.472255362 | None | None | N |
E/C | 0.6913 | likely_pathogenic | 0.6828 | pathogenic | -0.122 | Destabilizing | 0.998 | D | 0.614 | neutral | None | None | None | None | N |
E/D | 0.0929 | likely_benign | 0.0993 | benign | -0.462 | Destabilizing | 0.822 | D | 0.317 | neutral | N | 0.472388648 | None | None | N |
E/F | 0.6526 | likely_pathogenic | 0.6514 | pathogenic | -0.269 | Destabilizing | 0.978 | D | 0.587 | neutral | None | None | None | None | N |
E/G | 0.0925 | likely_benign | 0.0916 | benign | -0.654 | Destabilizing | 0.822 | D | 0.393 | neutral | N | 0.481045416 | None | None | N |
E/H | 0.3304 | likely_benign | 0.3381 | benign | -0.212 | Destabilizing | 0.998 | D | 0.323 | neutral | None | None | None | None | N |
E/I | 0.2604 | likely_benign | 0.2781 | benign | 0.17 | Stabilizing | 0.956 | D | 0.58 | neutral | None | None | None | None | N |
E/K | 0.0878 | likely_benign | 0.09 | benign | 0.004 | Stabilizing | 0.822 | D | 0.321 | neutral | N | 0.509696242 | None | None | N |
E/L | 0.2927 | likely_benign | 0.2982 | benign | 0.17 | Stabilizing | 0.754 | D | 0.455 | neutral | None | None | None | None | N |
E/M | 0.2975 | likely_benign | 0.3065 | benign | 0.301 | Stabilizing | 0.998 | D | 0.51 | neutral | None | None | None | None | N |
E/N | 0.1397 | likely_benign | 0.1493 | benign | -0.221 | Destabilizing | 0.956 | D | 0.339 | neutral | None | None | None | None | N |
E/P | 0.6573 | likely_pathogenic | 0.6581 | pathogenic | -0.006 | Destabilizing | 0.978 | D | 0.403 | neutral | None | None | None | None | N |
E/Q | 0.1135 | likely_benign | 0.1145 | benign | -0.165 | Destabilizing | 0.97 | D | 0.355 | neutral | N | 0.512736547 | None | None | N |
E/R | 0.1778 | likely_benign | 0.1769 | benign | 0.229 | Stabilizing | 0.956 | D | 0.345 | neutral | None | None | None | None | N |
E/S | 0.1264 | likely_benign | 0.1292 | benign | -0.425 | Destabilizing | 0.754 | D | 0.287 | neutral | None | None | None | None | N |
E/T | 0.1249 | likely_benign | 0.1322 | benign | -0.243 | Destabilizing | 0.019 | N | 0.303 | neutral | None | None | None | None | N |
E/V | 0.1518 | likely_benign | 0.1574 | benign | -0.006 | Destabilizing | 0.698 | D | 0.382 | neutral | N | 0.497980526 | None | None | N |
E/W | 0.8196 | likely_pathogenic | 0.8148 | pathogenic | -0.135 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
E/Y | 0.4826 | ambiguous | 0.4837 | ambiguous | -0.045 | Destabilizing | 0.993 | D | 0.495 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.