Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24387 | 73384;73385;73386 | chr2:178572973;178572972;178572971 | chr2:179437700;179437699;179437698 |
N2AB | 22746 | 68461;68462;68463 | chr2:178572973;178572972;178572971 | chr2:179437700;179437699;179437698 |
N2A | 21819 | 65680;65681;65682 | chr2:178572973;178572972;178572971 | chr2:179437700;179437699;179437698 |
N2B | 15322 | 46189;46190;46191 | chr2:178572973;178572972;178572971 | chr2:179437700;179437699;179437698 |
Novex-1 | 15447 | 46564;46565;46566 | chr2:178572973;178572972;178572971 | chr2:179437700;179437699;179437698 |
Novex-2 | 15514 | 46765;46766;46767 | chr2:178572973;178572972;178572971 | chr2:179437700;179437699;179437698 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.997 | N | 0.743 | 0.415 | 0.491112125781 | gnomAD-4.0.0 | 1.59265E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86004E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0764 | likely_benign | 0.0793 | benign | -0.547 | Destabilizing | 0.977 | D | 0.448 | neutral | N | 0.48585587 | None | None | N |
T/C | 0.3048 | likely_benign | 0.3182 | benign | -0.369 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/D | 0.2869 | likely_benign | 0.3248 | benign | 0.531 | Stabilizing | 0.995 | D | 0.671 | neutral | None | None | None | None | N |
T/E | 0.209 | likely_benign | 0.2335 | benign | 0.475 | Stabilizing | 0.966 | D | 0.645 | neutral | None | None | None | None | N |
T/F | 0.2413 | likely_benign | 0.2556 | benign | -1.042 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
T/G | 0.1719 | likely_benign | 0.192 | benign | -0.685 | Destabilizing | 0.995 | D | 0.643 | neutral | None | None | None | None | N |
T/H | 0.1934 | likely_benign | 0.2091 | benign | -0.955 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/I | 0.1357 | likely_benign | 0.1445 | benign | -0.298 | Destabilizing | 0.997 | D | 0.743 | deleterious | N | 0.48564206 | None | None | N |
T/K | 0.1291 | likely_benign | 0.145 | benign | -0.256 | Destabilizing | 0.289 | N | 0.315 | neutral | None | None | None | None | N |
T/L | 0.0869 | likely_benign | 0.0896 | benign | -0.298 | Destabilizing | 0.983 | D | 0.617 | neutral | None | None | None | None | N |
T/M | 0.0913 | likely_benign | 0.0963 | benign | -0.136 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/N | 0.1056 | likely_benign | 0.1186 | benign | -0.125 | Destabilizing | 0.993 | D | 0.61 | neutral | N | 0.472004349 | None | None | N |
T/P | 0.0863 | likely_benign | 0.0965 | benign | -0.353 | Destabilizing | 0.997 | D | 0.743 | deleterious | N | 0.51925238 | None | None | N |
T/Q | 0.1658 | likely_benign | 0.1817 | benign | -0.293 | Destabilizing | 0.995 | D | 0.74 | deleterious | None | None | None | None | N |
T/R | 0.1299 | likely_benign | 0.141 | benign | -0.066 | Destabilizing | 0.99 | D | 0.67 | neutral | None | None | None | None | N |
T/S | 0.0924 | likely_benign | 0.1001 | benign | -0.419 | Destabilizing | 0.977 | D | 0.417 | neutral | N | 0.482136786 | None | None | N |
T/V | 0.1107 | likely_benign | 0.118 | benign | -0.353 | Destabilizing | 0.991 | D | 0.517 | neutral | None | None | None | None | N |
T/W | 0.5499 | ambiguous | 0.5821 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/Y | 0.2729 | likely_benign | 0.2974 | benign | -0.724 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.