Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24394 | 73405;73406;73407 | chr2:178572952;178572951;178572950 | chr2:179437679;179437678;179437677 |
N2AB | 22753 | 68482;68483;68484 | chr2:178572952;178572951;178572950 | chr2:179437679;179437678;179437677 |
N2A | 21826 | 65701;65702;65703 | chr2:178572952;178572951;178572950 | chr2:179437679;179437678;179437677 |
N2B | 15329 | 46210;46211;46212 | chr2:178572952;178572951;178572950 | chr2:179437679;179437678;179437677 |
Novex-1 | 15454 | 46585;46586;46587 | chr2:178572952;178572951;178572950 | chr2:179437679;179437678;179437677 |
Novex-2 | 15521 | 46786;46787;46788 | chr2:178572952;178572951;178572950 | chr2:179437679;179437678;179437677 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs750460710 | -1.259 | 0.434 | N | 0.221 | 0.117 | 0.254761474806 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66445E-04 |
E/D | rs750460710 | -1.259 | 0.434 | N | 0.221 | 0.117 | 0.254761474806 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs750460710 | -1.259 | 0.434 | N | 0.221 | 0.117 | 0.254761474806 | gnomAD-4.0.0 | 7.43885E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.01733E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.121 | likely_benign | 0.1258 | benign | -0.916 | Destabilizing | 0.998 | D | 0.667 | neutral | N | 0.48211966 | None | None | N |
E/C | 0.769 | likely_pathogenic | 0.7854 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/D | 0.1408 | likely_benign | 0.1645 | benign | -1.091 | Destabilizing | 0.434 | N | 0.221 | neutral | N | 0.480131424 | None | None | N |
E/F | 0.7259 | likely_pathogenic | 0.7469 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/G | 0.1819 | likely_benign | 0.1911 | benign | -1.308 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.501807304 | None | None | N |
E/H | 0.4777 | ambiguous | 0.4983 | ambiguous | -0.401 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/I | 0.2716 | likely_benign | 0.286 | benign | 0.164 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/K | 0.2076 | likely_benign | 0.2122 | benign | -0.672 | Destabilizing | 0.998 | D | 0.548 | neutral | N | 0.507109802 | None | None | N |
E/L | 0.3374 | likely_benign | 0.3652 | ambiguous | 0.164 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/M | 0.3618 | ambiguous | 0.3831 | ambiguous | 0.622 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/N | 0.2237 | likely_benign | 0.2601 | benign | -1.214 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/P | 0.354 | ambiguous | 0.381 | ambiguous | -0.175 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
E/Q | 0.1413 | likely_benign | 0.1403 | benign | -1.054 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.515614642 | None | None | N |
E/R | 0.3508 | ambiguous | 0.3615 | ambiguous | -0.319 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/S | 0.1834 | likely_benign | 0.199 | benign | -1.564 | Destabilizing | 0.997 | D | 0.594 | neutral | None | None | None | None | N |
E/T | 0.175 | likely_benign | 0.1832 | benign | -1.234 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/V | 0.1716 | likely_benign | 0.1748 | benign | -0.175 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.481652361 | None | None | N |
E/W | 0.901 | likely_pathogenic | 0.9067 | pathogenic | 0.088 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/Y | 0.5954 | likely_pathogenic | 0.6229 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.