Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24404 | 73435;73436;73437 | chr2:178572922;178572921;178572920 | chr2:179437649;179437648;179437647 |
N2AB | 22763 | 68512;68513;68514 | chr2:178572922;178572921;178572920 | chr2:179437649;179437648;179437647 |
N2A | 21836 | 65731;65732;65733 | chr2:178572922;178572921;178572920 | chr2:179437649;179437648;179437647 |
N2B | 15339 | 46240;46241;46242 | chr2:178572922;178572921;178572920 | chr2:179437649;179437648;179437647 |
Novex-1 | 15464 | 46615;46616;46617 | chr2:178572922;178572921;178572920 | chr2:179437649;179437648;179437647 |
Novex-2 | 15531 | 46816;46817;46818 | chr2:178572922;178572921;178572920 | chr2:179437649;179437648;179437647 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.873 | N | 0.527 | 0.372 | 0.603539076606 | gnomAD-4.0.0 | 1.36879E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99593E-07 | 1.15939E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0627 | likely_benign | 0.0626 | benign | -0.322 | Destabilizing | 0.001 | N | 0.063 | neutral | N | 0.444405118 | None | None | I |
S/C | 0.0814 | likely_benign | 0.0803 | benign | -0.236 | Destabilizing | 0.003 | N | 0.178 | neutral | N | 0.468432723 | None | None | I |
S/D | 0.2797 | likely_benign | 0.3302 | benign | -0.028 | Destabilizing | 0.561 | D | 0.329 | neutral | None | None | None | None | I |
S/E | 0.328 | likely_benign | 0.3665 | ambiguous | -0.145 | Destabilizing | 0.39 | N | 0.279 | neutral | None | None | None | None | I |
S/F | 0.1969 | likely_benign | 0.2204 | benign | -1.06 | Destabilizing | 0.772 | D | 0.525 | neutral | N | 0.494930769 | None | None | I |
S/G | 0.0698 | likely_benign | 0.073 | benign | -0.368 | Destabilizing | 0.209 | N | 0.293 | neutral | None | None | None | None | I |
S/H | 0.2315 | likely_benign | 0.2753 | benign | -0.826 | Destabilizing | 0.965 | D | 0.412 | neutral | None | None | None | None | I |
S/I | 0.1107 | likely_benign | 0.1132 | benign | -0.332 | Destabilizing | 0.004 | N | 0.422 | neutral | None | None | None | None | I |
S/K | 0.3027 | likely_benign | 0.3625 | ambiguous | -0.336 | Destabilizing | 0.004 | N | 0.156 | neutral | None | None | None | None | I |
S/L | 0.0828 | likely_benign | 0.0841 | benign | -0.332 | Destabilizing | 0.083 | N | 0.53 | neutral | None | None | None | None | I |
S/M | 0.1387 | likely_benign | 0.1362 | benign | -0.019 | Destabilizing | 0.818 | D | 0.425 | neutral | None | None | None | None | I |
S/N | 0.0966 | likely_benign | 0.1057 | benign | -0.068 | Destabilizing | 0.561 | D | 0.347 | neutral | None | None | None | None | I |
S/P | 0.2897 | likely_benign | 0.3494 | ambiguous | -0.305 | Destabilizing | 0.873 | D | 0.434 | neutral | N | 0.503320135 | None | None | I |
S/Q | 0.2874 | likely_benign | 0.3338 | benign | -0.375 | Destabilizing | 0.818 | D | 0.321 | neutral | None | None | None | None | I |
S/R | 0.255 | likely_benign | 0.3227 | benign | -0.085 | Destabilizing | 0.39 | N | 0.456 | neutral | None | None | None | None | I |
S/T | 0.0693 | likely_benign | 0.071 | benign | -0.197 | Destabilizing | 0.285 | N | 0.305 | neutral | N | 0.512091547 | None | None | I |
S/V | 0.118 | likely_benign | 0.1219 | benign | -0.305 | Destabilizing | 0.083 | N | 0.519 | neutral | None | None | None | None | I |
S/W | 0.3531 | ambiguous | 0.3932 | ambiguous | -1.078 | Destabilizing | 0.991 | D | 0.548 | neutral | None | None | None | None | I |
S/Y | 0.18 | likely_benign | 0.2063 | benign | -0.787 | Destabilizing | 0.873 | D | 0.527 | neutral | N | 0.48818282 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.