Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24439 | 73540;73541;73542 | chr2:178572817;178572816;178572815 | chr2:179437544;179437543;179437542 |
N2AB | 22798 | 68617;68618;68619 | chr2:178572817;178572816;178572815 | chr2:179437544;179437543;179437542 |
N2A | 21871 | 65836;65837;65838 | chr2:178572817;178572816;178572815 | chr2:179437544;179437543;179437542 |
N2B | 15374 | 46345;46346;46347 | chr2:178572817;178572816;178572815 | chr2:179437544;179437543;179437542 |
Novex-1 | 15499 | 46720;46721;46722 | chr2:178572817;178572816;178572815 | chr2:179437544;179437543;179437542 |
Novex-2 | 15566 | 46921;46922;46923 | chr2:178572817;178572816;178572815 | chr2:179437544;179437543;179437542 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs750110781 | 0.297 | 0.006 | N | 0.255 | 0.118 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
T/I | rs750110781 | 0.297 | 0.006 | N | 0.255 | 0.118 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs750110781 | 0.297 | 0.006 | N | 0.255 | 0.118 | None | gnomAD-4.0.0 | 5.12694E-06 | None | None | None | None | I | None | 5.07683E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.3942E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0905 | likely_benign | 0.1037 | benign | -0.503 | Destabilizing | 0.139 | N | 0.273 | neutral | N | 0.493681727 | None | None | I |
T/C | 0.283 | likely_benign | 0.3193 | benign | -0.428 | Destabilizing | 0.007 | N | 0.265 | neutral | None | None | None | None | I |
T/D | 0.5357 | ambiguous | 0.586 | pathogenic | 0.306 | Stabilizing | 0.543 | D | 0.329 | neutral | None | None | None | None | I |
T/E | 0.525 | ambiguous | 0.5292 | ambiguous | 0.308 | Stabilizing | 0.704 | D | 0.351 | neutral | None | None | None | None | I |
T/F | 0.2744 | likely_benign | 0.325 | benign | -0.625 | Destabilizing | 0.893 | D | 0.377 | neutral | None | None | None | None | I |
T/G | 0.2812 | likely_benign | 0.3366 | benign | -0.742 | Destabilizing | 0.704 | D | 0.343 | neutral | None | None | None | None | I |
T/H | 0.2876 | likely_benign | 0.3399 | benign | -0.894 | Destabilizing | 0.944 | D | 0.35 | neutral | None | None | None | None | I |
T/I | 0.1207 | likely_benign | 0.1302 | benign | 0.03 | Stabilizing | 0.006 | N | 0.255 | neutral | N | 0.49184764 | None | None | I |
T/K | 0.4687 | ambiguous | 0.4592 | ambiguous | -0.445 | Destabilizing | 0.704 | D | 0.339 | neutral | None | None | None | None | I |
T/L | 0.1048 | likely_benign | 0.1159 | benign | 0.03 | Stabilizing | 0.329 | N | 0.379 | neutral | None | None | None | None | I |
T/M | 0.0892 | likely_benign | 0.0958 | benign | -0.025 | Destabilizing | 0.944 | D | 0.373 | neutral | None | None | None | None | I |
T/N | 0.0861 | likely_benign | 0.1074 | benign | -0.427 | Destabilizing | 0.023 | N | 0.219 | neutral | N | 0.483150799 | None | None | I |
T/P | 0.2178 | likely_benign | 0.2581 | benign | -0.115 | Destabilizing | 0.975 | D | 0.404 | neutral | N | 0.518929233 | None | None | I |
T/Q | 0.3234 | likely_benign | 0.3505 | ambiguous | -0.505 | Destabilizing | 0.944 | D | 0.386 | neutral | None | None | None | None | I |
T/R | 0.4189 | ambiguous | 0.4211 | ambiguous | -0.257 | Destabilizing | 0.944 | D | 0.404 | neutral | None | None | None | None | I |
T/S | 0.0996 | likely_benign | 0.1224 | benign | -0.716 | Destabilizing | 0.065 | N | 0.224 | neutral | N | 0.49080749 | None | None | I |
T/V | 0.0982 | likely_benign | 0.0981 | benign | -0.115 | Destabilizing | 0.031 | N | 0.175 | neutral | None | None | None | None | I |
T/W | 0.6679 | likely_pathogenic | 0.7171 | pathogenic | -0.624 | Destabilizing | 0.995 | D | 0.392 | neutral | None | None | None | None | I |
T/Y | 0.3066 | likely_benign | 0.3582 | ambiguous | -0.346 | Destabilizing | 0.981 | D | 0.355 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.