Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24441 | 73546;73547;73548 | chr2:178572811;178572810;178572809 | chr2:179437538;179437537;179437536 |
N2AB | 22800 | 68623;68624;68625 | chr2:178572811;178572810;178572809 | chr2:179437538;179437537;179437536 |
N2A | 21873 | 65842;65843;65844 | chr2:178572811;178572810;178572809 | chr2:179437538;179437537;179437536 |
N2B | 15376 | 46351;46352;46353 | chr2:178572811;178572810;178572809 | chr2:179437538;179437537;179437536 |
Novex-1 | 15501 | 46726;46727;46728 | chr2:178572811;178572810;178572809 | chr2:179437538;179437537;179437536 |
Novex-2 | 15568 | 46927;46928;46929 | chr2:178572811;178572810;178572809 | chr2:179437538;179437537;179437536 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1559418326 | None | 0.997 | N | 0.581 | 0.307 | 0.40722173914 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs1559418326 | None | 0.997 | N | 0.581 | 0.307 | 0.40722173914 | gnomAD-4.0.0 | 3.42177E-06 | None | None | None | None | I | None | 0 | 2.23664E-05 | None | 0 | 0 | None | 0 | 0 | 3.59846E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9596 | likely_pathogenic | 0.9539 | pathogenic | 0.127 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
R/C | 0.7615 | likely_pathogenic | 0.7542 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
R/D | 0.9866 | likely_pathogenic | 0.9852 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
R/E | 0.9274 | likely_pathogenic | 0.9216 | pathogenic | -0.091 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | I |
R/F | 0.9752 | likely_pathogenic | 0.9735 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
R/G | 0.9298 | likely_pathogenic | 0.9178 | pathogenic | -0.078 | Destabilizing | 1.0 | D | 0.675 | neutral | N | 0.521522899 | None | None | I |
R/H | 0.3897 | ambiguous | 0.3837 | ambiguous | -0.664 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
R/I | 0.9423 | likely_pathogenic | 0.9407 | pathogenic | 0.632 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
R/K | 0.3167 | likely_benign | 0.2901 | benign | 0.02 | Stabilizing | 0.997 | D | 0.581 | neutral | N | 0.491306135 | None | None | I |
R/L | 0.8574 | likely_pathogenic | 0.8445 | pathogenic | 0.632 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
R/M | 0.9118 | likely_pathogenic | 0.9043 | pathogenic | 0.091 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.492569318 | None | None | I |
R/N | 0.97 | likely_pathogenic | 0.9681 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
R/P | 0.9156 | likely_pathogenic | 0.9024 | pathogenic | 0.485 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
R/Q | 0.4148 | ambiguous | 0.3878 | ambiguous | 0.136 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
R/S | 0.9746 | likely_pathogenic | 0.9696 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.502578816 | None | None | I |
R/T | 0.9373 | likely_pathogenic | 0.9307 | pathogenic | 0.144 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.502404686 | None | None | I |
R/V | 0.9511 | likely_pathogenic | 0.9487 | pathogenic | 0.485 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
R/W | 0.7326 | likely_pathogenic | 0.721 | pathogenic | -0.155 | Destabilizing | 1.0 | D | 0.761 | deleterious | D | 0.534146652 | None | None | I |
R/Y | 0.9162 | likely_pathogenic | 0.9125 | pathogenic | 0.258 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.