Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24450 | 73573;73574;73575 | chr2:178572784;178572783;178572782 | chr2:179437511;179437510;179437509 |
N2AB | 22809 | 68650;68651;68652 | chr2:178572784;178572783;178572782 | chr2:179437511;179437510;179437509 |
N2A | 21882 | 65869;65870;65871 | chr2:178572784;178572783;178572782 | chr2:179437511;179437510;179437509 |
N2B | 15385 | 46378;46379;46380 | chr2:178572784;178572783;178572782 | chr2:179437511;179437510;179437509 |
Novex-1 | 15510 | 46753;46754;46755 | chr2:178572784;178572783;178572782 | chr2:179437511;179437510;179437509 |
Novex-2 | 15577 | 46954;46955;46956 | chr2:178572784;178572783;178572782 | chr2:179437511;179437510;179437509 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.025 | N | 0.408 | 0.197 | 0.342631996419 | gnomAD-4.0.0 | 6.84326E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9959E-07 | 0 | 0 |
V/F | rs771025206 | -0.963 | 0.983 | N | 0.771 | 0.524 | 0.771652491224 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/F | rs771025206 | -0.963 | 0.983 | N | 0.771 | 0.524 | 0.771652491224 | gnomAD-4.0.0 | 2.7374E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59841E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8051 | likely_pathogenic | 0.7925 | pathogenic | -1.523 | Destabilizing | 0.025 | N | 0.408 | neutral | N | 0.457805984 | None | None | I |
V/C | 0.9298 | likely_pathogenic | 0.9288 | pathogenic | -0.948 | Destabilizing | 0.997 | D | 0.774 | deleterious | None | None | None | None | I |
V/D | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -1.735 | Destabilizing | 0.983 | D | 0.863 | deleterious | N | 0.497918239 | None | None | I |
V/E | 0.9954 | likely_pathogenic | 0.9947 | pathogenic | -1.544 | Destabilizing | 0.975 | D | 0.826 | deleterious | None | None | None | None | I |
V/F | 0.8208 | likely_pathogenic | 0.818 | pathogenic | -0.912 | Destabilizing | 0.983 | D | 0.771 | deleterious | N | 0.49766475 | None | None | I |
V/G | 0.9548 | likely_pathogenic | 0.9503 | pathogenic | -1.985 | Destabilizing | 0.935 | D | 0.803 | deleterious | N | 0.471166704 | None | None | I |
V/H | 0.9972 | likely_pathogenic | 0.9968 | pathogenic | -1.461 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | I |
V/I | 0.1013 | likely_benign | 0.1052 | benign | -0.263 | Destabilizing | 0.773 | D | 0.589 | neutral | N | 0.473044796 | None | None | I |
V/K | 0.9963 | likely_pathogenic | 0.9959 | pathogenic | -1.181 | Destabilizing | 0.975 | D | 0.829 | deleterious | None | None | None | None | I |
V/L | 0.656 | likely_pathogenic | 0.6674 | pathogenic | -0.263 | Destabilizing | 0.63 | D | 0.686 | prob.neutral | N | 0.484876413 | None | None | I |
V/M | 0.7678 | likely_pathogenic | 0.7648 | pathogenic | -0.279 | Destabilizing | 0.996 | D | 0.724 | prob.delet. | None | None | None | None | I |
V/N | 0.9944 | likely_pathogenic | 0.9933 | pathogenic | -1.504 | Destabilizing | 0.987 | D | 0.861 | deleterious | None | None | None | None | I |
V/P | 0.9952 | likely_pathogenic | 0.9947 | pathogenic | -0.655 | Destabilizing | 0.987 | D | 0.841 | deleterious | None | None | None | None | I |
V/Q | 0.9908 | likely_pathogenic | 0.9893 | pathogenic | -1.374 | Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | I |
V/R | 0.9908 | likely_pathogenic | 0.9896 | pathogenic | -1.026 | Destabilizing | 0.987 | D | 0.85 | deleterious | None | None | None | None | I |
V/S | 0.9415 | likely_pathogenic | 0.9309 | pathogenic | -2.088 | Highly Destabilizing | 0.95 | D | 0.791 | deleterious | None | None | None | None | I |
V/T | 0.9094 | likely_pathogenic | 0.9011 | pathogenic | -1.749 | Destabilizing | 0.916 | D | 0.695 | prob.neutral | None | None | None | None | I |
V/W | 0.9979 | likely_pathogenic | 0.9978 | pathogenic | -1.295 | Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | I |
V/Y | 0.9897 | likely_pathogenic | 0.989 | pathogenic | -0.866 | Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.