Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24456 | 73591;73592;73593 | chr2:178572766;178572765;178572764 | chr2:179437493;179437492;179437491 |
N2AB | 22815 | 68668;68669;68670 | chr2:178572766;178572765;178572764 | chr2:179437493;179437492;179437491 |
N2A | 21888 | 65887;65888;65889 | chr2:178572766;178572765;178572764 | chr2:179437493;179437492;179437491 |
N2B | 15391 | 46396;46397;46398 | chr2:178572766;178572765;178572764 | chr2:179437493;179437492;179437491 |
Novex-1 | 15516 | 46771;46772;46773 | chr2:178572766;178572765;178572764 | chr2:179437493;179437492;179437491 |
Novex-2 | 15583 | 46972;46973;46974 | chr2:178572766;178572765;178572764 | chr2:179437493;179437492;179437491 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 1.0 | D | 0.761 | 0.69 | 0.868472475781 | gnomAD-4.0.0 | 1.59187E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85951E-06 | 0 | 0 |
P/R | None | None | 1.0 | D | 0.76 | 0.698 | 0.86712314379 | gnomAD-4.0.0 | 1.59187E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85951E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9602 | likely_pathogenic | 0.9541 | pathogenic | -0.446 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | D | 0.557999623 | None | None | I |
P/C | 0.9972 | likely_pathogenic | 0.9968 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
P/D | 0.9925 | likely_pathogenic | 0.9908 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
P/E | 0.9917 | likely_pathogenic | 0.9892 | pathogenic | -0.399 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
P/F | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -0.801 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
P/G | 0.9902 | likely_pathogenic | 0.9889 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/H | 0.991 | likely_pathogenic | 0.99 | pathogenic | -0.191 | Destabilizing | 1.0 | D | 0.761 | deleterious | D | 0.631976756 | None | None | I |
P/I | 0.9849 | likely_pathogenic | 0.9826 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
P/K | 0.992 | likely_pathogenic | 0.991 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
P/L | 0.9522 | likely_pathogenic | 0.9441 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | D | 0.615957395 | None | None | I |
P/M | 0.9888 | likely_pathogenic | 0.9874 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
P/N | 0.9913 | likely_pathogenic | 0.991 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
P/Q | 0.9903 | likely_pathogenic | 0.989 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
P/R | 0.9858 | likely_pathogenic | 0.9843 | pathogenic | 0.185 | Stabilizing | 1.0 | D | 0.76 | deleterious | D | 0.631573148 | None | None | I |
P/S | 0.9885 | likely_pathogenic | 0.987 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.56884895 | None | None | I |
P/T | 0.9689 | likely_pathogenic | 0.9633 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | D | 0.631573148 | None | None | I |
P/V | 0.9726 | likely_pathogenic | 0.968 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
P/W | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/Y | 0.9973 | likely_pathogenic | 0.9972 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.