Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24459 | 73600;73601;73602 | chr2:178572757;178572756;178572755 | chr2:179437484;179437483;179437482 |
N2AB | 22818 | 68677;68678;68679 | chr2:178572757;178572756;178572755 | chr2:179437484;179437483;179437482 |
N2A | 21891 | 65896;65897;65898 | chr2:178572757;178572756;178572755 | chr2:179437484;179437483;179437482 |
N2B | 15394 | 46405;46406;46407 | chr2:178572757;178572756;178572755 | chr2:179437484;179437483;179437482 |
Novex-1 | 15519 | 46780;46781;46782 | chr2:178572757;178572756;178572755 | chr2:179437484;179437483;179437482 |
Novex-2 | 15586 | 46981;46982;46983 | chr2:178572757;178572756;178572755 | chr2:179437484;179437483;179437482 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.892 | D | 0.556 | 0.5 | 0.671833516112 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | rs1446425983 | None | 0.892 | N | 0.541 | 0.325 | 0.458101713262 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1446425983 | None | 0.892 | N | 0.541 | 0.325 | 0.458101713262 | gnomAD-4.0.0 | 4.33869E-06 | None | None | None | None | I | None | 1.33529E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.2387E-06 | 0 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1458 | likely_benign | 0.1598 | benign | -0.352 | Destabilizing | 0.892 | D | 0.591 | neutral | N | 0.498027048 | None | None | I |
E/C | 0.8101 | likely_pathogenic | 0.8246 | pathogenic | -0.135 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | I |
E/D | 0.1284 | likely_benign | 0.1487 | benign | -0.446 | Destabilizing | 0.011 | N | 0.252 | neutral | N | 0.497266579 | None | None | I |
E/F | 0.7604 | likely_pathogenic | 0.7829 | pathogenic | -0.247 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
E/G | 0.258 | likely_benign | 0.2802 | benign | -0.563 | Destabilizing | 0.892 | D | 0.556 | neutral | D | 0.531388402 | None | None | I |
E/H | 0.4097 | ambiguous | 0.4258 | ambiguous | -0.081 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
E/I | 0.2542 | likely_benign | 0.2792 | benign | 0.172 | Stabilizing | 0.987 | D | 0.724 | prob.delet. | None | None | None | None | I |
E/K | 0.1399 | likely_benign | 0.1485 | benign | 0.093 | Stabilizing | 0.892 | D | 0.541 | neutral | N | 0.487113824 | None | None | I |
E/L | 0.3303 | likely_benign | 0.3489 | ambiguous | 0.172 | Stabilizing | 0.987 | D | 0.71 | prob.delet. | None | None | None | None | I |
E/M | 0.3877 | ambiguous | 0.4097 | ambiguous | 0.212 | Stabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/N | 0.2072 | likely_benign | 0.2398 | benign | -0.13 | Destabilizing | 0.95 | D | 0.597 | neutral | None | None | None | None | I |
E/P | 0.9023 | likely_pathogenic | 0.9147 | pathogenic | 0.018 | Stabilizing | 0.987 | D | 0.678 | prob.neutral | None | None | None | None | I |
E/Q | 0.1325 | likely_benign | 0.132 | benign | -0.094 | Destabilizing | 0.983 | D | 0.577 | neutral | D | 0.536579852 | None | None | I |
E/R | 0.2542 | likely_benign | 0.2638 | benign | 0.33 | Stabilizing | 0.987 | D | 0.641 | neutral | None | None | None | None | I |
E/S | 0.1805 | likely_benign | 0.1954 | benign | -0.314 | Destabilizing | 0.916 | D | 0.543 | neutral | None | None | None | None | I |
E/T | 0.1619 | likely_benign | 0.1728 | benign | -0.151 | Destabilizing | 0.975 | D | 0.619 | neutral | None | None | None | None | I |
E/V | 0.1534 | likely_benign | 0.1617 | benign | 0.018 | Stabilizing | 0.983 | D | 0.673 | neutral | N | 0.48832981 | None | None | I |
E/W | 0.917 | likely_pathogenic | 0.9248 | pathogenic | -0.127 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | I |
E/Y | 0.637 | likely_pathogenic | 0.6685 | pathogenic | -0.022 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.