Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24466 | 73621;73622;73623 | chr2:178572736;178572735;178572734 | chr2:179437463;179437462;179437461 |
N2AB | 22825 | 68698;68699;68700 | chr2:178572736;178572735;178572734 | chr2:179437463;179437462;179437461 |
N2A | 21898 | 65917;65918;65919 | chr2:178572736;178572735;178572734 | chr2:179437463;179437462;179437461 |
N2B | 15401 | 46426;46427;46428 | chr2:178572736;178572735;178572734 | chr2:179437463;179437462;179437461 |
Novex-1 | 15526 | 46801;46802;46803 | chr2:178572736;178572735;178572734 | chr2:179437463;179437462;179437461 |
Novex-2 | 15593 | 47002;47003;47004 | chr2:178572736;178572735;178572734 | chr2:179437463;179437462;179437461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs756789484 | 0.221 | 0.002 | N | 0.205 | 0.097 | 0.101711395817 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Q | rs375373437 | 0.289 | 0.642 | N | 0.297 | 0.174 | 0.0666544352282 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | None | None | 0.473 | N | 0.227 | 0.28 | 0.158396225186 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1154 | likely_benign | 0.1379 | benign | 0.333 | Stabilizing | 0.495 | N | 0.317 | neutral | None | None | None | None | N |
H/C | 0.1082 | likely_benign | 0.1275 | benign | 0.482 | Stabilizing | 0.995 | D | 0.324 | neutral | None | None | None | None | N |
H/D | 0.0849 | likely_benign | 0.0985 | benign | -0.188 | Destabilizing | 0.002 | N | 0.197 | neutral | N | 0.267595776 | None | None | N |
H/E | 0.1384 | likely_benign | 0.1643 | benign | -0.198 | Destabilizing | 0.329 | N | 0.3 | neutral | None | None | None | None | N |
H/F | 0.221 | likely_benign | 0.264 | benign | 0.711 | Stabilizing | 0.981 | D | 0.317 | neutral | None | None | None | None | N |
H/G | 0.1115 | likely_benign | 0.1236 | benign | 0.137 | Stabilizing | 0.329 | N | 0.333 | neutral | None | None | None | None | N |
H/I | 0.1966 | likely_benign | 0.2434 | benign | 0.801 | Stabilizing | 0.981 | D | 0.334 | neutral | None | None | None | None | N |
H/K | 0.1295 | likely_benign | 0.1453 | benign | 0.259 | Stabilizing | 0.013 | N | 0.202 | neutral | None | None | None | None | N |
H/L | 0.1002 | likely_benign | 0.1144 | benign | 0.801 | Stabilizing | 0.784 | D | 0.334 | neutral | N | 0.427405719 | None | None | N |
H/M | 0.2723 | likely_benign | 0.3124 | benign | 0.557 | Stabilizing | 0.981 | D | 0.297 | neutral | None | None | None | None | N |
H/N | 0.0498 | likely_benign | 0.052 | benign | 0.198 | Stabilizing | 0.002 | N | 0.205 | neutral | N | 0.337610434 | None | None | N |
H/P | 0.144 | likely_benign | 0.1649 | benign | 0.667 | Stabilizing | 0.917 | D | 0.358 | neutral | N | 0.445914122 | None | None | N |
H/Q | 0.0925 | likely_benign | 0.1037 | benign | 0.217 | Stabilizing | 0.642 | D | 0.297 | neutral | N | 0.41611129 | None | None | N |
H/R | 0.0772 | likely_benign | 0.0842 | benign | -0.103 | Destabilizing | 0.473 | N | 0.227 | neutral | N | 0.445567406 | None | None | N |
H/S | 0.0896 | likely_benign | 0.0994 | benign | 0.279 | Stabilizing | 0.329 | N | 0.323 | neutral | None | None | None | None | N |
H/T | 0.1059 | likely_benign | 0.1245 | benign | 0.355 | Stabilizing | 0.704 | D | 0.343 | neutral | None | None | None | None | N |
H/V | 0.1548 | likely_benign | 0.1872 | benign | 0.667 | Stabilizing | 0.828 | D | 0.356 | neutral | None | None | None | None | N |
H/W | 0.3617 | ambiguous | 0.4177 | ambiguous | 0.586 | Stabilizing | 0.995 | D | 0.329 | neutral | None | None | None | None | N |
H/Y | 0.099 | likely_benign | 0.1139 | benign | 0.881 | Stabilizing | 0.917 | D | 0.319 | neutral | N | 0.446260839 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.