Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24474 | 73645;73646;73647 | chr2:178572712;178572711;178572710 | chr2:179437439;179437438;179437437 |
N2AB | 22833 | 68722;68723;68724 | chr2:178572712;178572711;178572710 | chr2:179437439;179437438;179437437 |
N2A | 21906 | 65941;65942;65943 | chr2:178572712;178572711;178572710 | chr2:179437439;179437438;179437437 |
N2B | 15409 | 46450;46451;46452 | chr2:178572712;178572711;178572710 | chr2:179437439;179437438;179437437 |
Novex-1 | 15534 | 46825;46826;46827 | chr2:178572712;178572711;178572710 | chr2:179437439;179437438;179437437 |
Novex-2 | 15601 | 47026;47027;47028 | chr2:178572712;178572711;178572710 | chr2:179437439;179437438;179437437 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.012 | N | 0.12 | 0.104 | 0.192905019026 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0723 | likely_benign | 0.0763 | benign | -0.35 | Destabilizing | 0.373 | N | 0.335 | neutral | None | None | None | None | N |
S/C | 0.0996 | likely_benign | 0.1033 | benign | -0.367 | Destabilizing | 0.994 | D | 0.399 | neutral | N | 0.519476958 | None | None | N |
S/D | 0.2477 | likely_benign | 0.2596 | benign | 0.479 | Stabilizing | 0.59 | D | 0.269 | neutral | None | None | None | None | N |
S/E | 0.3415 | ambiguous | 0.353 | ambiguous | 0.43 | Stabilizing | 0.742 | D | 0.284 | neutral | None | None | None | None | N |
S/F | 0.1606 | likely_benign | 0.1755 | benign | -0.766 | Destabilizing | 0.953 | D | 0.473 | neutral | None | None | None | None | N |
S/G | 0.094 | likely_benign | 0.0951 | benign | -0.522 | Destabilizing | 0.472 | N | 0.291 | neutral | N | 0.48932741 | None | None | N |
S/H | 0.2169 | likely_benign | 0.2313 | benign | -0.949 | Destabilizing | 0.953 | D | 0.401 | neutral | None | None | None | None | N |
S/I | 0.1006 | likely_benign | 0.1044 | benign | -0.022 | Destabilizing | 0.884 | D | 0.435 | neutral | N | 0.447846147 | None | None | N |
S/K | 0.4657 | ambiguous | 0.4811 | ambiguous | -0.38 | Destabilizing | 0.373 | N | 0.292 | neutral | None | None | None | None | N |
S/L | 0.0913 | likely_benign | 0.0975 | benign | -0.022 | Destabilizing | 0.59 | D | 0.429 | neutral | None | None | None | None | N |
S/M | 0.1326 | likely_benign | 0.1503 | benign | -0.022 | Destabilizing | 0.984 | D | 0.403 | neutral | None | None | None | None | N |
S/N | 0.0762 | likely_benign | 0.0809 | benign | -0.248 | Destabilizing | 0.012 | N | 0.12 | neutral | N | 0.442610898 | None | None | N |
S/P | 0.66 | likely_pathogenic | 0.6525 | pathogenic | -0.099 | Destabilizing | 0.953 | D | 0.373 | neutral | None | None | None | None | N |
S/Q | 0.3078 | likely_benign | 0.3274 | benign | -0.379 | Destabilizing | 0.91 | D | 0.346 | neutral | None | None | None | None | N |
S/R | 0.4164 | ambiguous | 0.423 | ambiguous | -0.28 | Destabilizing | 0.007 | N | 0.255 | neutral | N | 0.445939205 | None | None | N |
S/T | 0.0599 | likely_benign | 0.0645 | benign | -0.328 | Destabilizing | 0.012 | N | 0.115 | neutral | N | 0.438802589 | None | None | N |
S/V | 0.1066 | likely_benign | 0.1138 | benign | -0.099 | Destabilizing | 0.59 | D | 0.403 | neutral | None | None | None | None | N |
S/W | 0.3387 | likely_benign | 0.3428 | ambiguous | -0.788 | Destabilizing | 0.996 | D | 0.561 | neutral | None | None | None | None | N |
S/Y | 0.153 | likely_benign | 0.1666 | benign | -0.484 | Destabilizing | 0.984 | D | 0.471 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.