Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24530 | 73813;73814;73815 | chr2:178572544;178572543;178572542 | chr2:179437271;179437270;179437269 |
N2AB | 22889 | 68890;68891;68892 | chr2:178572544;178572543;178572542 | chr2:179437271;179437270;179437269 |
N2A | 21962 | 66109;66110;66111 | chr2:178572544;178572543;178572542 | chr2:179437271;179437270;179437269 |
N2B | 15465 | 46618;46619;46620 | chr2:178572544;178572543;178572542 | chr2:179437271;179437270;179437269 |
Novex-1 | 15590 | 46993;46994;46995 | chr2:178572544;178572543;178572542 | chr2:179437271;179437270;179437269 |
Novex-2 | 15657 | 47194;47195;47196 | chr2:178572544;178572543;178572542 | chr2:179437271;179437270;179437269 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.859 | N | 0.554 | 0.293 | 0.424549175451 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/D | None | None | 0.14 | N | 0.403 | 0.033 | 0.112648838833 | gnomAD-4.0.0 | 6.84351E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99593E-07 | 0 | 0 |
E/K | None | None | 0.919 | N | 0.477 | 0.267 | 0.369867359543 | gnomAD-4.0.0 | 1.36869E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99585E-07 | 1.15955E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2646 | likely_benign | 0.2341 | benign | -0.507 | Destabilizing | 0.859 | D | 0.554 | neutral | N | 0.479611218 | None | None | N |
E/C | 0.8977 | likely_pathogenic | 0.9005 | pathogenic | -0.151 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
E/D | 0.0863 | likely_benign | 0.0929 | benign | -0.517 | Destabilizing | 0.14 | N | 0.403 | neutral | N | 0.452525956 | None | None | N |
E/F | 0.8577 | likely_pathogenic | 0.8483 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
E/G | 0.3278 | likely_benign | 0.2761 | benign | -0.755 | Destabilizing | 0.91 | D | 0.517 | neutral | N | 0.485802963 | None | None | N |
E/H | 0.694 | likely_pathogenic | 0.6747 | pathogenic | -0.182 | Destabilizing | 0.987 | D | 0.588 | neutral | None | None | None | None | N |
E/I | 0.6005 | likely_pathogenic | 0.6001 | pathogenic | 0.128 | Stabilizing | 0.98 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/K | 0.5428 | ambiguous | 0.4974 | ambiguous | 0.133 | Stabilizing | 0.919 | D | 0.477 | neutral | N | 0.485335664 | None | None | N |
E/L | 0.6501 | likely_pathogenic | 0.6222 | pathogenic | 0.128 | Stabilizing | 0.98 | D | 0.657 | neutral | None | None | None | None | N |
E/M | 0.6544 | likely_pathogenic | 0.6464 | pathogenic | 0.277 | Stabilizing | 0.99 | D | 0.595 | neutral | None | None | None | None | N |
E/N | 0.31 | likely_benign | 0.2979 | benign | -0.268 | Destabilizing | 0.023 | N | 0.26 | neutral | None | None | None | None | N |
E/P | 0.9753 | likely_pathogenic | 0.9658 | pathogenic | -0.063 | Destabilizing | 0.958 | D | 0.616 | neutral | None | None | None | None | N |
E/Q | 0.3439 | ambiguous | 0.3083 | benign | -0.207 | Destabilizing | 0.966 | D | 0.545 | neutral | N | 0.48039814 | None | None | N |
E/R | 0.6985 | likely_pathogenic | 0.6563 | pathogenic | 0.353 | Stabilizing | 0.981 | D | 0.576 | neutral | None | None | None | None | N |
E/S | 0.3248 | likely_benign | 0.2965 | benign | -0.445 | Destabilizing | 0.802 | D | 0.488 | neutral | None | None | None | None | N |
E/T | 0.364 | ambiguous | 0.35 | ambiguous | -0.242 | Destabilizing | 0.975 | D | 0.57 | neutral | None | None | None | None | N |
E/V | 0.4012 | ambiguous | 0.3854 | ambiguous | -0.063 | Destabilizing | 0.964 | D | 0.623 | neutral | N | 0.49751489 | None | None | N |
E/W | 0.9506 | likely_pathogenic | 0.9485 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/Y | 0.7317 | likely_pathogenic | 0.7165 | pathogenic | 0.009 | Stabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.