Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2454573858;73859;73860 chr2:178572499;178572498;178572497chr2:179437226;179437225;179437224
N2AB2290468935;68936;68937 chr2:178572499;178572498;178572497chr2:179437226;179437225;179437224
N2A2197766154;66155;66156 chr2:178572499;178572498;178572497chr2:179437226;179437225;179437224
N2B1548046663;46664;46665 chr2:178572499;178572498;178572497chr2:179437226;179437225;179437224
Novex-11560547038;47039;47040 chr2:178572499;178572498;178572497chr2:179437226;179437225;179437224
Novex-21567247239;47240;47241 chr2:178572499;178572498;178572497chr2:179437226;179437225;179437224
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-66
  • Domain position: 27
  • Structural Position: 29
  • Q(SASA): 0.409
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs865922152 None 0.323 N 0.393 0.252 0.37262878642 gnomAD-4.0.0 1.36879E-06 None None None None I None 2.99079E-05 0 None 0 0 None 0 0 0 0 1.657E-05
L/R None None 0.159 N 0.389 0.168 0.33085137897 gnomAD-4.0.0 1.36879E-06 None None None None I None 0 0 None 0 0 None 0 0 1.79924E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2783 likely_benign 0.262 benign -0.529 Destabilizing 0.035 N 0.367 neutral None None None None I
L/C 0.559 ambiguous 0.5146 ambiguous -0.633 Destabilizing 0.879 D 0.316 neutral None None None None I
L/D 0.7157 likely_pathogenic 0.7027 pathogenic -0.022 Destabilizing None N 0.287 neutral None None None None I
L/E 0.5027 ambiguous 0.4744 ambiguous -0.111 Destabilizing 0.032 N 0.459 neutral None None None None I
L/F 0.1976 likely_benign 0.1956 benign -0.556 Destabilizing None N 0.223 neutral N 0.444557046 None None I
L/G 0.6281 likely_pathogenic 0.5657 pathogenic -0.684 Destabilizing 0.082 N 0.441 neutral None None None None I
L/H 0.2904 likely_benign 0.2808 benign 0.003 Stabilizing 0.694 D 0.334 neutral N 0.468433984 None None I
L/I 0.0681 likely_benign 0.0672 benign -0.246 Destabilizing None N 0.082 neutral N 0.402806424 None None I
L/K 0.4919 ambiguous 0.4906 ambiguous -0.258 Destabilizing 0.009 N 0.4 neutral None None None None I
L/M 0.1131 likely_benign 0.1141 benign -0.378 Destabilizing 0.036 N 0.346 neutral None None None None I
L/N 0.2793 likely_benign 0.2664 benign -0.07 Destabilizing 0.135 N 0.407 neutral None None None None I
L/P 0.7705 likely_pathogenic 0.6899 pathogenic -0.308 Destabilizing 0.323 N 0.393 neutral N 0.478130902 None None I
L/Q 0.2424 likely_benign 0.2222 benign -0.271 Destabilizing 0.208 N 0.379 neutral None None None None I
L/R 0.3977 ambiguous 0.3714 ambiguous 0.249 Stabilizing 0.159 N 0.389 neutral N 0.468260625 None None I
L/S 0.2996 likely_benign 0.2762 benign -0.532 Destabilizing 0.082 N 0.443 neutral None None None None I
L/T 0.189 likely_benign 0.1762 benign -0.509 Destabilizing 0.026 N 0.414 neutral None None None None I
L/V 0.0939 likely_benign 0.0942 benign -0.308 Destabilizing None N 0.209 neutral N 0.442767535 None None I
L/W 0.391 ambiguous 0.3488 ambiguous -0.572 Destabilizing 0.915 D 0.338 neutral None None None None I
L/Y 0.4063 ambiguous 0.4186 ambiguous -0.318 Destabilizing 0.007 N 0.381 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.