Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24552 | 73879;73880;73881 | chr2:178572478;178572477;178572476 | chr2:179437205;179437204;179437203 |
N2AB | 22911 | 68956;68957;68958 | chr2:178572478;178572477;178572476 | chr2:179437205;179437204;179437203 |
N2A | 21984 | 66175;66176;66177 | chr2:178572478;178572477;178572476 | chr2:179437205;179437204;179437203 |
N2B | 15487 | 46684;46685;46686 | chr2:178572478;178572477;178572476 | chr2:179437205;179437204;179437203 |
Novex-1 | 15612 | 47059;47060;47061 | chr2:178572478;178572477;178572476 | chr2:179437205;179437204;179437203 |
Novex-2 | 15679 | 47260;47261;47262 | chr2:178572478;178572477;178572476 | chr2:179437205;179437204;179437203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.008 | N | 0.365 | 0.12 | 0.134241683229 | gnomAD-4.0.0 | 1.59307E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43382E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6512 | likely_pathogenic | 0.4781 | ambiguous | -0.304 | Destabilizing | 0.018 | N | 0.438 | neutral | None | None | None | None | I |
K/C | 0.7448 | likely_pathogenic | 0.6078 | pathogenic | -0.212 | Destabilizing | 0.879 | D | 0.349 | neutral | None | None | None | None | I |
K/D | 0.8935 | likely_pathogenic | 0.7953 | pathogenic | -0.261 | Destabilizing | 0.043 | N | 0.347 | neutral | None | None | None | None | I |
K/E | 0.5233 | ambiguous | 0.3777 | ambiguous | -0.194 | Destabilizing | 0.004 | N | 0.339 | neutral | N | 0.497354168 | None | None | I |
K/F | 0.9203 | likely_pathogenic | 0.8496 | pathogenic | -0.11 | Destabilizing | 0.201 | N | 0.385 | neutral | None | None | None | None | I |
K/G | 0.7459 | likely_pathogenic | 0.542 | ambiguous | -0.636 | Destabilizing | 0.018 | N | 0.364 | neutral | None | None | None | None | I |
K/H | 0.4085 | ambiguous | 0.2774 | benign | -1.084 | Destabilizing | 0.114 | N | 0.388 | neutral | None | None | None | None | I |
K/I | 0.5118 | ambiguous | 0.4311 | ambiguous | 0.537 | Stabilizing | 0.009 | N | 0.403 | neutral | None | None | None | None | I |
K/L | 0.5602 | ambiguous | 0.4123 | ambiguous | 0.537 | Stabilizing | 0.001 | N | 0.361 | neutral | None | None | None | None | I |
K/M | 0.4489 | ambiguous | 0.319 | benign | 0.496 | Stabilizing | 0.148 | N | 0.385 | neutral | N | 0.52073246 | None | None | I |
K/N | 0.659 | likely_pathogenic | 0.4369 | ambiguous | -0.226 | Destabilizing | None | N | 0.119 | neutral | N | 0.475325457 | None | None | I |
K/P | 0.9704 | likely_pathogenic | 0.9401 | pathogenic | 0.287 | Stabilizing | 0.387 | N | 0.404 | neutral | None | None | None | None | I |
K/Q | 0.2395 | likely_benign | 0.162 | benign | -0.358 | Destabilizing | 0.008 | N | 0.365 | neutral | N | 0.453526033 | None | None | I |
K/R | 0.091 | likely_benign | 0.0797 | benign | -0.56 | Destabilizing | None | N | 0.071 | neutral | N | 0.457470415 | None | None | I |
K/S | 0.6632 | likely_pathogenic | 0.4558 | ambiguous | -0.747 | Destabilizing | 0.001 | N | 0.125 | neutral | None | None | None | None | I |
K/T | 0.2654 | likely_benign | 0.1794 | benign | -0.499 | Destabilizing | None | N | 0.159 | neutral | N | 0.374889104 | None | None | I |
K/V | 0.5122 | ambiguous | 0.417 | ambiguous | 0.287 | Stabilizing | 0.002 | N | 0.393 | neutral | None | None | None | None | I |
K/W | 0.8735 | likely_pathogenic | 0.7819 | pathogenic | -0.041 | Destabilizing | 0.915 | D | 0.465 | neutral | None | None | None | None | I |
K/Y | 0.8229 | likely_pathogenic | 0.6961 | pathogenic | 0.245 | Stabilizing | 0.082 | N | 0.372 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.