Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24561 | 73906;73907;73908 | chr2:178572451;178572450;178572449 | chr2:179437178;179437177;179437176 |
N2AB | 22920 | 68983;68984;68985 | chr2:178572451;178572450;178572449 | chr2:179437178;179437177;179437176 |
N2A | 21993 | 66202;66203;66204 | chr2:178572451;178572450;178572449 | chr2:179437178;179437177;179437176 |
N2B | 15496 | 46711;46712;46713 | chr2:178572451;178572450;178572449 | chr2:179437178;179437177;179437176 |
Novex-1 | 15621 | 47086;47087;47088 | chr2:178572451;178572450;178572449 | chr2:179437178;179437177;179437176 |
Novex-2 | 15688 | 47287;47288;47289 | chr2:178572451;178572450;178572449 | chr2:179437178;179437177;179437176 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.911 | N | 0.617 | 0.361 | 0.445410361449 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0689 | likely_benign | 0.0629 | benign | -0.812 | Destabilizing | 0.001 | N | 0.206 | neutral | N | 0.411967412 | None | None | N |
S/C | 0.2305 | likely_benign | 0.2011 | benign | -0.464 | Destabilizing | 0.99 | D | 0.603 | neutral | None | None | None | None | N |
S/D | 0.8857 | likely_pathogenic | 0.8614 | pathogenic | 0.483 | Stabilizing | 0.881 | D | 0.511 | neutral | None | None | None | None | N |
S/E | 0.8952 | likely_pathogenic | 0.8848 | pathogenic | 0.465 | Stabilizing | 0.836 | D | 0.514 | neutral | None | None | None | None | N |
S/F | 0.6073 | likely_pathogenic | 0.4969 | ambiguous | -1.008 | Destabilizing | 0.99 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/G | 0.1589 | likely_benign | 0.1342 | benign | -1.031 | Destabilizing | 0.772 | D | 0.502 | neutral | None | None | None | None | N |
S/H | 0.8245 | likely_pathogenic | 0.7867 | pathogenic | -1.312 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
S/I | 0.4065 | ambiguous | 0.3334 | benign | -0.338 | Destabilizing | 0.979 | D | 0.678 | prob.neutral | None | None | None | None | N |
S/K | 0.965 | likely_pathogenic | 0.9571 | pathogenic | -0.417 | Destabilizing | 0.932 | D | 0.522 | neutral | None | None | None | None | N |
S/L | 0.2148 | likely_benign | 0.1689 | benign | -0.338 | Destabilizing | 0.911 | D | 0.617 | neutral | N | 0.491236272 | None | None | N |
S/M | 0.2961 | likely_benign | 0.2554 | benign | -0.14 | Destabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | N |
S/N | 0.4048 | ambiguous | 0.3548 | ambiguous | -0.267 | Destabilizing | 0.752 | D | 0.539 | neutral | None | None | None | None | N |
S/P | 0.7425 | likely_pathogenic | 0.6252 | pathogenic | -0.464 | Destabilizing | 0.009 | N | 0.317 | neutral | N | 0.493988576 | None | None | N |
S/Q | 0.8395 | likely_pathogenic | 0.8153 | pathogenic | -0.433 | Destabilizing | 0.99 | D | 0.545 | neutral | None | None | None | None | N |
S/R | 0.9608 | likely_pathogenic | 0.9485 | pathogenic | -0.294 | Destabilizing | 0.99 | D | 0.579 | neutral | None | None | None | None | N |
S/T | 0.124 | likely_benign | 0.1064 | benign | -0.447 | Destabilizing | 0.243 | N | 0.541 | neutral | N | 0.445733269 | None | None | N |
S/V | 0.3214 | likely_benign | 0.2663 | benign | -0.464 | Destabilizing | 0.718 | D | 0.616 | neutral | None | None | None | None | N |
S/W | 0.8278 | likely_pathogenic | 0.7486 | pathogenic | -0.9 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/Y | 0.6037 | likely_pathogenic | 0.5126 | ambiguous | -0.662 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.