Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2457 | 7594;7595;7596 | chr2:178773687;178773686;178773685 | chr2:179638414;179638413;179638412 |
N2AB | 2457 | 7594;7595;7596 | chr2:178773687;178773686;178773685 | chr2:179638414;179638413;179638412 |
N2A | 2457 | 7594;7595;7596 | chr2:178773687;178773686;178773685 | chr2:179638414;179638413;179638412 |
N2B | 2411 | 7456;7457;7458 | chr2:178773687;178773686;178773685 | chr2:179638414;179638413;179638412 |
Novex-1 | 2411 | 7456;7457;7458 | chr2:178773687;178773686;178773685 | chr2:179638414;179638413;179638412 |
Novex-2 | 2411 | 7456;7457;7458 | chr2:178773687;178773686;178773685 | chr2:179638414;179638413;179638412 |
Novex-3 | 2457 | 7594;7595;7596 | chr2:178773687;178773686;178773685 | chr2:179638414;179638413;179638412 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.117 | N | 0.417 | 0.16 | 0.688619951122 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2801 | likely_benign | 0.2719 | benign | -0.855 | Destabilizing | 0.035 | N | 0.422 | neutral | None | None | None | None | N |
I/C | 0.7406 | likely_pathogenic | 0.7323 | pathogenic | -0.679 | Destabilizing | 0.824 | D | 0.411 | neutral | None | None | None | None | N |
I/D | 0.8137 | likely_pathogenic | 0.7999 | pathogenic | -0.299 | Destabilizing | 0.791 | D | 0.489 | neutral | None | None | None | None | N |
I/E | 0.6272 | likely_pathogenic | 0.6058 | pathogenic | -0.385 | Destabilizing | 0.555 | D | 0.485 | neutral | None | None | None | None | N |
I/F | 0.1926 | likely_benign | 0.1803 | benign | -0.778 | Destabilizing | 0.188 | N | 0.373 | neutral | N | 0.51121623 | None | None | N |
I/G | 0.7331 | likely_pathogenic | 0.7167 | pathogenic | -1.043 | Destabilizing | 0.555 | D | 0.477 | neutral | None | None | None | None | N |
I/H | 0.6053 | likely_pathogenic | 0.5895 | pathogenic | -0.277 | Destabilizing | 0.935 | D | 0.481 | neutral | None | None | None | None | N |
I/K | 0.3466 | ambiguous | 0.3299 | benign | -0.506 | Destabilizing | 0.555 | D | 0.475 | neutral | None | None | None | None | N |
I/L | 0.0925 | likely_benign | 0.0875 | benign | -0.478 | Destabilizing | None | N | 0.188 | neutral | N | 0.492445608 | None | None | N |
I/M | 0.1006 | likely_benign | 0.0967 | benign | -0.422 | Destabilizing | 0.188 | N | 0.413 | neutral | N | 0.506009482 | None | None | N |
I/N | 0.4321 | ambiguous | 0.4169 | ambiguous | -0.3 | Destabilizing | 0.741 | D | 0.483 | neutral | N | 0.504170429 | None | None | N |
I/P | 0.6581 | likely_pathogenic | 0.6405 | pathogenic | -0.57 | Destabilizing | 0.791 | D | 0.485 | neutral | None | None | None | None | N |
I/Q | 0.4619 | ambiguous | 0.4426 | ambiguous | -0.544 | Destabilizing | 0.791 | D | 0.481 | neutral | None | None | None | None | N |
I/R | 0.2653 | likely_benign | 0.2495 | benign | 0.1 | Stabilizing | 0.555 | D | 0.482 | neutral | None | None | None | None | N |
I/S | 0.366 | ambiguous | 0.3542 | ambiguous | -0.788 | Destabilizing | 0.317 | N | 0.478 | neutral | N | 0.498520943 | None | None | N |
I/T | 0.1212 | likely_benign | 0.1197 | benign | -0.766 | Destabilizing | 0.117 | N | 0.417 | neutral | N | 0.469401489 | None | None | N |
I/V | 0.0782 | likely_benign | 0.0779 | benign | -0.57 | Destabilizing | None | N | 0.205 | neutral | N | 0.447169318 | None | None | N |
I/W | 0.7385 | likely_pathogenic | 0.7276 | pathogenic | -0.776 | Destabilizing | 0.935 | D | 0.529 | neutral | None | None | None | None | N |
I/Y | 0.571 | likely_pathogenic | 0.5525 | ambiguous | -0.541 | Destabilizing | 0.555 | D | 0.432 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.