Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24581 | 73966;73967;73968 | chr2:178572391;178572390;178572389 | chr2:179437118;179437117;179437116 |
N2AB | 22940 | 69043;69044;69045 | chr2:178572391;178572390;178572389 | chr2:179437118;179437117;179437116 |
N2A | 22013 | 66262;66263;66264 | chr2:178572391;178572390;178572389 | chr2:179437118;179437117;179437116 |
N2B | 15516 | 46771;46772;46773 | chr2:178572391;178572390;178572389 | chr2:179437118;179437117;179437116 |
Novex-1 | 15641 | 47146;47147;47148 | chr2:178572391;178572390;178572389 | chr2:179437118;179437117;179437116 |
Novex-2 | 15708 | 47347;47348;47349 | chr2:178572391;178572390;178572389 | chr2:179437118;179437117;179437116 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.035 | N | 0.486 | 0.138 | 0.266385636622 | gnomAD-4.0.0 | 6.84517E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99845E-07 | 0 | 0 |
D/E | rs727504603 | None | None | N | 0.132 | 0.076 | 0.115124310173 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/E | rs727504603 | None | None | N | 0.132 | 0.076 | 0.115124310173 | gnomAD-4.0.0 | 2.46432E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87322E-05 | 0 | 3.14953E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1913 | likely_benign | 0.1797 | benign | -0.395 | Destabilizing | 0.035 | N | 0.486 | neutral | N | 0.498066244 | None | None | N |
D/C | 0.574 | likely_pathogenic | 0.5413 | ambiguous | -0.043 | Destabilizing | 0.846 | D | 0.607 | neutral | None | None | None | None | N |
D/E | 0.0926 | likely_benign | 0.0992 | benign | -0.439 | Destabilizing | None | N | 0.132 | neutral | N | 0.429705024 | None | None | N |
D/F | 0.6431 | likely_pathogenic | 0.5886 | pathogenic | -0.181 | Destabilizing | 0.948 | D | 0.587 | neutral | None | None | None | None | N |
D/G | 0.1826 | likely_benign | 0.1712 | benign | -0.652 | Destabilizing | None | N | 0.196 | neutral | N | 0.476768252 | None | None | N |
D/H | 0.3654 | ambiguous | 0.342 | ambiguous | -0.217 | Destabilizing | 0.627 | D | 0.527 | neutral | N | 0.516190645 | None | None | N |
D/I | 0.3675 | ambiguous | 0.3433 | ambiguous | 0.252 | Stabilizing | 0.856 | D | 0.602 | neutral | None | None | None | None | N |
D/K | 0.4439 | ambiguous | 0.4612 | ambiguous | 0.11 | Stabilizing | 0.296 | N | 0.44 | neutral | None | None | None | None | N |
D/L | 0.3516 | ambiguous | 0.3265 | benign | 0.252 | Stabilizing | 0.746 | D | 0.577 | neutral | None | None | None | None | N |
D/M | 0.5488 | ambiguous | 0.5101 | ambiguous | 0.493 | Stabilizing | 0.962 | D | 0.587 | neutral | None | None | None | None | N |
D/N | 0.1291 | likely_benign | 0.1226 | benign | -0.275 | Destabilizing | None | N | 0.287 | neutral | N | 0.476632179 | None | None | N |
D/P | 0.4573 | ambiguous | 0.4699 | ambiguous | 0.06 | Stabilizing | 0.106 | N | 0.545 | neutral | None | None | None | None | N |
D/Q | 0.3153 | likely_benign | 0.3053 | benign | -0.205 | Destabilizing | 0.355 | N | 0.461 | neutral | None | None | None | None | N |
D/R | 0.528 | ambiguous | 0.5371 | ambiguous | 0.284 | Stabilizing | 0.746 | D | 0.582 | neutral | None | None | None | None | N |
D/S | 0.1261 | likely_benign | 0.1188 | benign | -0.412 | Destabilizing | 0.046 | N | 0.405 | neutral | None | None | None | None | N |
D/T | 0.2062 | likely_benign | 0.1889 | benign | -0.206 | Destabilizing | 0.094 | N | 0.49 | neutral | None | None | None | None | N |
D/V | 0.2403 | likely_benign | 0.2225 | benign | 0.06 | Stabilizing | 0.28 | N | 0.577 | neutral | N | 0.483251507 | None | None | N |
D/W | 0.898 | likely_pathogenic | 0.8871 | pathogenic | -0.004 | Destabilizing | 0.986 | D | 0.611 | neutral | None | None | None | None | N |
D/Y | 0.3439 | ambiguous | 0.3234 | benign | 0.066 | Stabilizing | 0.932 | D | 0.587 | neutral | N | 0.478863976 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.