Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24626 | 74101;74102;74103 | chr2:178572256;178572255;178572254 | chr2:179436983;179436982;179436981 |
N2AB | 22985 | 69178;69179;69180 | chr2:178572256;178572255;178572254 | chr2:179436983;179436982;179436981 |
N2A | 22058 | 66397;66398;66399 | chr2:178572256;178572255;178572254 | chr2:179436983;179436982;179436981 |
N2B | 15561 | 46906;46907;46908 | chr2:178572256;178572255;178572254 | chr2:179436983;179436982;179436981 |
Novex-1 | 15686 | 47281;47282;47283 | chr2:178572256;178572255;178572254 | chr2:179436983;179436982;179436981 |
Novex-2 | 15753 | 47482;47483;47484 | chr2:178572256;178572255;178572254 | chr2:179436983;179436982;179436981 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1060500561 | None | None | N | 0.051 | 0.177 | 0.21737058555 | gnomAD-4.0.0 | 2.73769E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.47343E-04 | 8.99627E-07 | 0 | 1.65722E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.1679 | likely_benign | 0.1429 | benign | -0.248 | Destabilizing | None | N | 0.154 | neutral | None | None | None | None | N |
M/C | 0.5349 | ambiguous | 0.5053 | ambiguous | -0.437 | Destabilizing | 0.114 | N | 0.367 | neutral | None | None | None | None | N |
M/D | 0.5434 | ambiguous | 0.5188 | ambiguous | 0.645 | Stabilizing | 0.001 | N | 0.336 | neutral | None | None | None | None | N |
M/E | 0.2808 | likely_benign | 0.2401 | benign | 0.593 | Stabilizing | None | N | 0.283 | neutral | None | None | None | None | N |
M/F | 0.3331 | likely_benign | 0.243 | benign | 0.055 | Stabilizing | None | N | 0.2 | neutral | None | None | None | None | N |
M/G | 0.3429 | ambiguous | 0.2905 | benign | -0.414 | Destabilizing | 0.003 | N | 0.302 | neutral | None | None | None | None | N |
M/H | 0.2666 | likely_benign | 0.2575 | benign | 0.376 | Stabilizing | 0.14 | N | 0.424 | neutral | None | None | None | None | N |
M/I | 0.1602 | likely_benign | 0.1096 | benign | 0.088 | Stabilizing | None | N | 0.051 | neutral | N | 0.371774228 | None | None | N |
M/K | 0.0879 | likely_benign | 0.0861 | benign | 0.653 | Stabilizing | None | N | 0.103 | neutral | N | 0.366232336 | None | None | N |
M/L | 0.0884 | likely_benign | 0.0767 | benign | 0.088 | Stabilizing | None | N | 0.046 | neutral | N | 0.363058744 | None | None | N |
M/N | 0.23 | likely_benign | 0.2152 | benign | 0.728 | Stabilizing | 0.002 | N | 0.32 | neutral | None | None | None | None | N |
M/P | 0.833 | likely_pathogenic | 0.7934 | pathogenic | 0.006 | Stabilizing | 0.005 | N | 0.317 | neutral | None | None | None | None | N |
M/Q | 0.1196 | likely_benign | 0.1167 | benign | 0.583 | Stabilizing | 0.003 | N | 0.22 | neutral | None | None | None | None | N |
M/R | 0.102 | likely_benign | 0.0945 | benign | 1.076 | Stabilizing | None | N | 0.13 | neutral | N | 0.419989463 | None | None | N |
M/S | 0.1731 | likely_benign | 0.1582 | benign | 0.237 | Stabilizing | 0.001 | N | 0.244 | neutral | None | None | None | None | N |
M/T | 0.0697 | likely_benign | 0.0705 | benign | 0.293 | Stabilizing | None | N | 0.102 | neutral | N | 0.304509086 | None | None | N |
M/V | 0.0656 | likely_benign | 0.0548 | benign | 0.006 | Stabilizing | None | N | 0.056 | neutral | N | 0.330023606 | None | None | N |
M/W | 0.552 | ambiguous | 0.4687 | ambiguous | 0.058 | Stabilizing | 0.369 | N | 0.282 | neutral | None | None | None | None | N |
M/Y | 0.5128 | ambiguous | 0.4463 | ambiguous | 0.251 | Stabilizing | 0.008 | N | 0.297 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.