Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24642 | 74149;74150;74151 | chr2:178572208;178572207;178572206 | chr2:179436935;179436934;179436933 |
N2AB | 23001 | 69226;69227;69228 | chr2:178572208;178572207;178572206 | chr2:179436935;179436934;179436933 |
N2A | 22074 | 66445;66446;66447 | chr2:178572208;178572207;178572206 | chr2:179436935;179436934;179436933 |
N2B | 15577 | 46954;46955;46956 | chr2:178572208;178572207;178572206 | chr2:179436935;179436934;179436933 |
Novex-1 | 15702 | 47329;47330;47331 | chr2:178572208;178572207;178572206 | chr2:179436935;179436934;179436933 |
Novex-2 | 15769 | 47530;47531;47532 | chr2:178572208;178572207;178572206 | chr2:179436935;179436934;179436933 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.951 | N | 0.446 | 0.242 | 0.269111216191 | gnomAD-4.0.0 | 4.77602E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71863E-06 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7675 | likely_pathogenic | 0.7141 | pathogenic | 0.303 | Stabilizing | 0.901 | D | 0.581 | neutral | None | None | None | None | N |
H/C | 0.5069 | ambiguous | 0.4896 | ambiguous | 0.599 | Stabilizing | 0.996 | D | 0.683 | prob.neutral | None | None | None | None | N |
H/D | 0.7243 | likely_pathogenic | 0.6315 | pathogenic | 0.113 | Stabilizing | 0.978 | D | 0.487 | neutral | N | 0.43420398 | None | None | N |
H/E | 0.8431 | likely_pathogenic | 0.7697 | pathogenic | 0.125 | Stabilizing | 0.885 | D | 0.497 | neutral | None | None | None | None | N |
H/F | 0.4808 | ambiguous | 0.3985 | ambiguous | 0.828 | Stabilizing | 0.718 | D | 0.535 | neutral | None | None | None | None | N |
H/G | 0.7457 | likely_pathogenic | 0.7074 | pathogenic | 0.051 | Stabilizing | 0.949 | D | 0.55 | neutral | None | None | None | None | N |
H/I | 0.8084 | likely_pathogenic | 0.7141 | pathogenic | 0.931 | Stabilizing | 0.927 | D | 0.657 | neutral | None | None | None | None | N |
H/K | 0.8133 | likely_pathogenic | 0.7597 | pathogenic | 0.279 | Stabilizing | 0.963 | D | 0.481 | neutral | None | None | None | None | N |
H/L | 0.5429 | ambiguous | 0.4351 | ambiguous | 0.931 | Stabilizing | 0.579 | D | 0.592 | neutral | N | 0.500178256 | None | None | N |
H/M | 0.7821 | likely_pathogenic | 0.7167 | pathogenic | 0.706 | Stabilizing | 0.997 | D | 0.629 | neutral | None | None | None | None | N |
H/N | 0.2688 | likely_benign | 0.2279 | benign | 0.28 | Stabilizing | 0.808 | D | 0.525 | neutral | N | 0.45223238 | None | None | N |
H/P | 0.9542 | likely_pathogenic | 0.9347 | pathogenic | 0.747 | Stabilizing | 0.978 | D | 0.631 | neutral | N | 0.493406999 | None | None | N |
H/Q | 0.6617 | likely_pathogenic | 0.582 | pathogenic | 0.347 | Stabilizing | 0.953 | D | 0.471 | neutral | N | 0.500351614 | None | None | N |
H/R | 0.5986 | likely_pathogenic | 0.5138 | ambiguous | -0.189 | Destabilizing | 0.951 | D | 0.446 | neutral | N | 0.474666523 | None | None | N |
H/S | 0.5275 | ambiguous | 0.4785 | ambiguous | 0.298 | Stabilizing | 0.949 | D | 0.523 | neutral | None | None | None | None | N |
H/T | 0.6903 | likely_pathogenic | 0.6115 | pathogenic | 0.409 | Stabilizing | 0.951 | D | 0.537 | neutral | None | None | None | None | N |
H/V | 0.7496 | likely_pathogenic | 0.6578 | pathogenic | 0.747 | Stabilizing | 0.93 | D | 0.559 | neutral | None | None | None | None | N |
H/W | 0.6631 | likely_pathogenic | 0.6075 | pathogenic | 0.786 | Stabilizing | 0.997 | D | 0.633 | neutral | None | None | None | None | N |
H/Y | 0.2225 | likely_benign | 0.1683 | benign | 1.095 | Stabilizing | 0.005 | N | 0.091 | neutral | N | 0.425720569 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.