Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24653 | 74182;74183;74184 | chr2:178572175;178572174;178572173 | chr2:179436902;179436901;179436900 |
N2AB | 23012 | 69259;69260;69261 | chr2:178572175;178572174;178572173 | chr2:179436902;179436901;179436900 |
N2A | 22085 | 66478;66479;66480 | chr2:178572175;178572174;178572173 | chr2:179436902;179436901;179436900 |
N2B | 15588 | 46987;46988;46989 | chr2:178572175;178572174;178572173 | chr2:179436902;179436901;179436900 |
Novex-1 | 15713 | 47362;47363;47364 | chr2:178572175;178572174;178572173 | chr2:179436902;179436901;179436900 |
Novex-2 | 15780 | 47563;47564;47565 | chr2:178572175;178572174;178572173 | chr2:179436902;179436901;179436900 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | D | 0.871 | 0.688 | 0.910307487806 | gnomAD-4.0.0 | 1.36872E-06 | None | None | None | None | N | None | 0 | 0 | None | 3.8279E-05 | 0 | None | 0 | 0 | 8.99582E-07 | 0 | 0 |
V/M | None | None | 1.0 | D | 0.744 | 0.483 | 0.78595867793 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.879 | likely_pathogenic | 0.8459 | pathogenic | -2.26 | Highly Destabilizing | 1.0 | D | 0.626 | neutral | D | 0.524525094 | None | None | N |
V/C | 0.9813 | likely_pathogenic | 0.9796 | pathogenic | -2.011 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/D | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -3.031 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/E | 0.9979 | likely_pathogenic | 0.9969 | pathogenic | -2.753 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.557214885 | None | None | N |
V/F | 0.9536 | likely_pathogenic | 0.9316 | pathogenic | -1.235 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/G | 0.9812 | likely_pathogenic | 0.9731 | pathogenic | -2.862 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.557214885 | None | None | N |
V/H | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -2.663 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/I | 0.0936 | likely_benign | 0.0883 | benign | -0.544 | Destabilizing | 0.878 | D | 0.304 | neutral | None | None | None | None | N |
V/K | 0.9983 | likely_pathogenic | 0.9974 | pathogenic | -1.869 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/L | 0.6331 | likely_pathogenic | 0.5897 | pathogenic | -0.544 | Destabilizing | 0.97 | D | 0.567 | neutral | D | 0.530611098 | None | None | N |
V/M | 0.7831 | likely_pathogenic | 0.7205 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.5453516 | None | None | N |
V/N | 0.9987 | likely_pathogenic | 0.9979 | pathogenic | -2.377 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/P | 0.9973 | likely_pathogenic | 0.9963 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Q | 0.9975 | likely_pathogenic | 0.9963 | pathogenic | -2.105 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/R | 0.9961 | likely_pathogenic | 0.9947 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/S | 0.9876 | likely_pathogenic | 0.9808 | pathogenic | -3.006 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/T | 0.8839 | likely_pathogenic | 0.8397 | pathogenic | -2.567 | Highly Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/W | 0.9993 | likely_pathogenic | 0.9988 | pathogenic | -1.791 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/Y | 0.9978 | likely_pathogenic | 0.9964 | pathogenic | -1.434 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.