Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24658 | 74197;74198;74199 | chr2:178572160;178572159;178572158 | chr2:179436887;179436886;179436885 |
N2AB | 23017 | 69274;69275;69276 | chr2:178572160;178572159;178572158 | chr2:179436887;179436886;179436885 |
N2A | 22090 | 66493;66494;66495 | chr2:178572160;178572159;178572158 | chr2:179436887;179436886;179436885 |
N2B | 15593 | 47002;47003;47004 | chr2:178572160;178572159;178572158 | chr2:179436887;179436886;179436885 |
Novex-1 | 15718 | 47377;47378;47379 | chr2:178572160;178572159;178572158 | chr2:179436887;179436886;179436885 |
Novex-2 | 15785 | 47578;47579;47580 | chr2:178572160;178572159;178572158 | chr2:179436887;179436886;179436885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.032 | N | 0.279 | 0.209 | 0.224531998449 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5099 | ambiguous | 0.4586 | ambiguous | 0.049 | Stabilizing | 0.979 | D | 0.578 | neutral | None | None | None | None | N |
K/C | 0.8892 | likely_pathogenic | 0.8772 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/D | 0.8339 | likely_pathogenic | 0.8071 | pathogenic | 0.075 | Stabilizing | 0.959 | D | 0.614 | neutral | None | None | None | None | N |
K/E | 0.424 | ambiguous | 0.379 | ambiguous | 0.068 | Stabilizing | 0.032 | N | 0.279 | neutral | N | 0.504338856 | None | None | N |
K/F | 0.9511 | likely_pathogenic | 0.9343 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
K/G | 0.6953 | likely_pathogenic | 0.6511 | pathogenic | -0.12 | Destabilizing | 0.994 | D | 0.621 | neutral | None | None | None | None | N |
K/H | 0.5604 | ambiguous | 0.5223 | ambiguous | -0.391 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | N |
K/I | 0.6737 | likely_pathogenic | 0.6125 | pathogenic | 0.408 | Stabilizing | 0.88 | D | 0.699 | prob.neutral | N | 0.470914712 | None | None | N |
K/L | 0.6808 | likely_pathogenic | 0.6273 | pathogenic | 0.408 | Stabilizing | 0.828 | D | 0.633 | neutral | None | None | None | None | N |
K/M | 0.5608 | ambiguous | 0.5022 | ambiguous | 0.216 | Stabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
K/N | 0.7478 | likely_pathogenic | 0.699 | pathogenic | 0.264 | Stabilizing | 0.992 | D | 0.627 | neutral | N | 0.475460616 | None | None | N |
K/P | 0.77 | likely_pathogenic | 0.7408 | pathogenic | 0.315 | Stabilizing | 0.997 | D | 0.665 | neutral | None | None | None | None | N |
K/Q | 0.2627 | likely_benign | 0.2342 | benign | 0.075 | Stabilizing | 0.882 | D | 0.61 | neutral | N | 0.492866854 | None | None | N |
K/R | 0.0894 | likely_benign | 0.0869 | benign | 0.016 | Stabilizing | 0.867 | D | 0.529 | neutral | N | 0.478903656 | None | None | N |
K/S | 0.6809 | likely_pathogenic | 0.6259 | pathogenic | -0.208 | Destabilizing | 0.979 | D | 0.589 | neutral | None | None | None | None | N |
K/T | 0.4584 | ambiguous | 0.4019 | ambiguous | -0.076 | Destabilizing | 0.974 | D | 0.62 | neutral | N | 0.51016875 | None | None | N |
K/V | 0.575 | likely_pathogenic | 0.5222 | ambiguous | 0.315 | Stabilizing | 0.928 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/W | 0.937 | likely_pathogenic | 0.9235 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/Y | 0.8905 | likely_pathogenic | 0.8672 | pathogenic | 0.096 | Stabilizing | 0.979 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.