Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24662 | 74209;74210;74211 | chr2:178572148;178572147;178572146 | chr2:179436875;179436874;179436873 |
N2AB | 23021 | 69286;69287;69288 | chr2:178572148;178572147;178572146 | chr2:179436875;179436874;179436873 |
N2A | 22094 | 66505;66506;66507 | chr2:178572148;178572147;178572146 | chr2:179436875;179436874;179436873 |
N2B | 15597 | 47014;47015;47016 | chr2:178572148;178572147;178572146 | chr2:179436875;179436874;179436873 |
Novex-1 | 15722 | 47389;47390;47391 | chr2:178572148;178572147;178572146 | chr2:179436875;179436874;179436873 |
Novex-2 | 15789 | 47590;47591;47592 | chr2:178572148;178572147;178572146 | chr2:179436875;179436874;179436873 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.882 | N | 0.627 | 0.17 | 0.187945064343 | gnomAD-4.0.0 | 1.59218E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85936E-06 | 0 | 0 |
K/R | None | None | 0.003 | N | 0.353 | 0.146 | 0.241078983079 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4586 | ambiguous | 0.4086 | ambiguous | 0.067 | Stabilizing | 0.739 | D | 0.563 | neutral | None | None | None | None | N |
K/C | 0.747 | likely_pathogenic | 0.7133 | pathogenic | -0.203 | Destabilizing | 0.996 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/D | 0.6845 | likely_pathogenic | 0.6206 | pathogenic | -0.117 | Destabilizing | 0.909 | D | 0.616 | neutral | None | None | None | None | N |
K/E | 0.2897 | likely_benign | 0.2526 | benign | -0.122 | Destabilizing | 0.243 | N | 0.582 | neutral | N | 0.442903608 | None | None | N |
K/F | 0.8623 | likely_pathogenic | 0.8101 | pathogenic | -0.217 | Destabilizing | 0.968 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/G | 0.5944 | likely_pathogenic | 0.535 | ambiguous | -0.09 | Destabilizing | 0.909 | D | 0.517 | neutral | None | None | None | None | N |
K/H | 0.3102 | likely_benign | 0.2938 | benign | -0.248 | Destabilizing | 0.969 | D | 0.639 | neutral | None | None | None | None | N |
K/I | 0.4383 | ambiguous | 0.3837 | ambiguous | 0.398 | Stabilizing | 0.309 | N | 0.692 | prob.neutral | N | 0.520097742 | None | None | N |
K/L | 0.4857 | ambiguous | 0.4345 | ambiguous | 0.398 | Stabilizing | 0.226 | N | 0.517 | neutral | None | None | None | None | N |
K/M | 0.3436 | ambiguous | 0.3053 | benign | 0.066 | Stabilizing | 0.965 | D | 0.647 | neutral | None | None | None | None | N |
K/N | 0.5072 | ambiguous | 0.4493 | ambiguous | 0.264 | Stabilizing | 0.882 | D | 0.627 | neutral | N | 0.508283238 | None | None | N |
K/P | 0.9359 | likely_pathogenic | 0.9099 | pathogenic | 0.313 | Stabilizing | 0.953 | D | 0.599 | neutral | None | None | None | None | N |
K/Q | 0.1554 | likely_benign | 0.1428 | benign | 0.109 | Stabilizing | 0.476 | N | 0.617 | neutral | N | 0.49419922 | None | None | N |
K/R | 0.0788 | likely_benign | 0.0771 | benign | 0.036 | Stabilizing | 0.003 | N | 0.353 | neutral | N | 0.481982071 | None | None | N |
K/S | 0.499 | ambiguous | 0.4462 | ambiguous | -0.133 | Destabilizing | 0.739 | D | 0.572 | neutral | None | None | None | None | N |
K/T | 0.2237 | likely_benign | 0.197 | benign | -0.011 | Destabilizing | 0.693 | D | 0.583 | neutral | N | 0.463569668 | None | None | N |
K/V | 0.405 | ambiguous | 0.3533 | ambiguous | 0.313 | Stabilizing | 0.278 | N | 0.622 | neutral | None | None | None | None | N |
K/W | 0.8597 | likely_pathogenic | 0.8151 | pathogenic | -0.301 | Destabilizing | 0.997 | D | 0.746 | deleterious | None | None | None | None | N |
K/Y | 0.7199 | likely_pathogenic | 0.6629 | pathogenic | 0.054 | Stabilizing | 0.485 | N | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.