Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24675 | 74248;74249;74250 | chr2:178572109;178572108;178572107 | chr2:179436836;179436835;179436834 |
N2AB | 23034 | 69325;69326;69327 | chr2:178572109;178572108;178572107 | chr2:179436836;179436835;179436834 |
N2A | 22107 | 66544;66545;66546 | chr2:178572109;178572108;178572107 | chr2:179436836;179436835;179436834 |
N2B | 15610 | 47053;47054;47055 | chr2:178572109;178572108;178572107 | chr2:179436836;179436835;179436834 |
Novex-1 | 15735 | 47428;47429;47430 | chr2:178572109;178572108;178572107 | chr2:179436836;179436835;179436834 |
Novex-2 | 15802 | 47629;47630;47631 | chr2:178572109;178572108;178572107 | chr2:179436836;179436835;179436834 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1553606008 | None | 0.006 | N | 0.263 | 0.227 | 0.186928172975 | gnomAD-4.0.0 | 1.59264E-06 | None | None | None | None | I | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0852 | likely_benign | 0.0839 | benign | -0.422 | Destabilizing | 0.003 | N | 0.196 | neutral | N | 0.488581802 | None | None | I |
T/C | 0.3316 | likely_benign | 0.3233 | benign | -0.279 | Destabilizing | 0.823 | D | 0.449 | neutral | None | None | None | None | I |
T/D | 0.457 | ambiguous | 0.4427 | ambiguous | 0.325 | Stabilizing | 0.013 | N | 0.351 | neutral | None | None | None | None | I |
T/E | 0.3126 | likely_benign | 0.2968 | benign | 0.255 | Stabilizing | 0.001 | N | 0.164 | neutral | None | None | None | None | I |
T/F | 0.2502 | likely_benign | 0.2236 | benign | -0.912 | Destabilizing | 0.278 | N | 0.521 | neutral | None | None | None | None | I |
T/G | 0.306 | likely_benign | 0.3019 | benign | -0.555 | Destabilizing | 0.176 | N | 0.36 | neutral | None | None | None | None | I |
T/H | 0.2319 | likely_benign | 0.2127 | benign | -0.913 | Destabilizing | 0.001 | N | 0.309 | neutral | None | None | None | None | I |
T/I | 0.1034 | likely_benign | 0.0946 | benign | -0.188 | Destabilizing | None | N | 0.156 | neutral | N | 0.487251903 | None | None | I |
T/K | 0.1842 | likely_benign | 0.1639 | benign | -0.313 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | I |
T/L | 0.0885 | likely_benign | 0.0856 | benign | -0.188 | Destabilizing | 0.025 | N | 0.249 | neutral | None | None | None | None | I |
T/M | 0.0832 | likely_benign | 0.0811 | benign | 0.012 | Stabilizing | 0.503 | D | 0.455 | neutral | None | None | None | None | I |
T/N | 0.1277 | likely_benign | 0.1264 | benign | -0.132 | Destabilizing | 0.045 | N | 0.271 | neutral | N | 0.475072676 | None | None | I |
T/P | 0.3558 | ambiguous | 0.3743 | ambiguous | -0.237 | Destabilizing | 0.087 | N | 0.452 | neutral | N | 0.484493652 | None | None | I |
T/Q | 0.1877 | likely_benign | 0.1787 | benign | -0.349 | Destabilizing | 0.005 | N | 0.224 | neutral | None | None | None | None | I |
T/R | 0.1631 | likely_benign | 0.1443 | benign | -0.104 | Destabilizing | 0.278 | N | 0.392 | neutral | None | None | None | None | I |
T/S | 0.1183 | likely_benign | 0.1179 | benign | -0.368 | Destabilizing | 0.006 | N | 0.263 | neutral | N | 0.485770645 | None | None | I |
T/V | 0.0772 | likely_benign | 0.0742 | benign | -0.237 | Destabilizing | 0.001 | N | 0.109 | neutral | None | None | None | None | I |
T/W | 0.6852 | likely_pathogenic | 0.6427 | pathogenic | -0.898 | Destabilizing | 0.984 | D | 0.485 | neutral | None | None | None | None | I |
T/Y | 0.3187 | likely_benign | 0.3005 | benign | -0.612 | Destabilizing | 0.01 | N | 0.294 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.