Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24685 | 74278;74279;74280 | chr2:178572079;178572078;178572077 | chr2:179436806;179436805;179436804 |
N2AB | 23044 | 69355;69356;69357 | chr2:178572079;178572078;178572077 | chr2:179436806;179436805;179436804 |
N2A | 22117 | 66574;66575;66576 | chr2:178572079;178572078;178572077 | chr2:179436806;179436805;179436804 |
N2B | 15620 | 47083;47084;47085 | chr2:178572079;178572078;178572077 | chr2:179436806;179436805;179436804 |
Novex-1 | 15745 | 47458;47459;47460 | chr2:178572079;178572078;178572077 | chr2:179436806;179436805;179436804 |
Novex-2 | 15812 | 47659;47660;47661 | chr2:178572079;178572078;178572077 | chr2:179436806;179436805;179436804 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | None | None | 0.992 | D | 0.848 | 0.859 | 0.898978955884 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9945 | likely_pathogenic | 0.9933 | pathogenic | -3.178 | Highly Destabilizing | 0.989 | D | 0.852 | deleterious | None | None | None | None | N |
Y/C | 0.946 | likely_pathogenic | 0.9386 | pathogenic | -2.048 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.649022935 | None | None | N |
Y/D | 0.9973 | likely_pathogenic | 0.9962 | pathogenic | -3.405 | Highly Destabilizing | 0.992 | D | 0.872 | deleterious | D | 0.681293822 | None | None | N |
Y/E | 0.9991 | likely_pathogenic | 0.9988 | pathogenic | -3.208 | Highly Destabilizing | 0.997 | D | 0.855 | deleterious | None | None | None | None | N |
Y/F | 0.4068 | ambiguous | 0.3723 | ambiguous | -1.13 | Destabilizing | 0.981 | D | 0.728 | prob.delet. | D | 0.602166755 | None | None | N |
Y/G | 0.9853 | likely_pathogenic | 0.9812 | pathogenic | -3.602 | Highly Destabilizing | 0.979 | D | 0.866 | deleterious | None | None | None | None | N |
Y/H | 0.9836 | likely_pathogenic | 0.9788 | pathogenic | -2.09 | Highly Destabilizing | 0.993 | D | 0.797 | deleterious | D | 0.665042296 | None | None | N |
Y/I | 0.9624 | likely_pathogenic | 0.9611 | pathogenic | -1.771 | Destabilizing | 0.963 | D | 0.832 | deleterious | None | None | None | None | N |
Y/K | 0.9984 | likely_pathogenic | 0.9978 | pathogenic | -2.295 | Highly Destabilizing | 0.975 | D | 0.859 | deleterious | None | None | None | None | N |
Y/L | 0.9389 | likely_pathogenic | 0.9291 | pathogenic | -1.771 | Destabilizing | 0.88 | D | 0.806 | deleterious | None | None | None | None | N |
Y/M | 0.9779 | likely_pathogenic | 0.9738 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
Y/N | 0.9725 | likely_pathogenic | 0.9631 | pathogenic | -3.048 | Highly Destabilizing | 0.338 | N | 0.724 | prob.delet. | D | 0.681092018 | None | None | N |
Y/P | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -2.255 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
Y/Q | 0.9984 | likely_pathogenic | 0.9977 | pathogenic | -2.822 | Highly Destabilizing | 0.99 | D | 0.833 | deleterious | None | None | None | None | N |
Y/R | 0.9958 | likely_pathogenic | 0.9946 | pathogenic | -1.993 | Destabilizing | 0.993 | D | 0.874 | deleterious | None | None | None | None | N |
Y/S | 0.9887 | likely_pathogenic | 0.9858 | pathogenic | -3.449 | Highly Destabilizing | 0.992 | D | 0.848 | deleterious | D | 0.681293822 | None | None | N |
Y/T | 0.9938 | likely_pathogenic | 0.9931 | pathogenic | -3.13 | Highly Destabilizing | 0.997 | D | 0.854 | deleterious | None | None | None | None | N |
Y/V | 0.9208 | likely_pathogenic | 0.9277 | pathogenic | -2.255 | Highly Destabilizing | 0.998 | D | 0.818 | deleterious | None | None | None | None | N |
Y/W | 0.9416 | likely_pathogenic | 0.9305 | pathogenic | -0.441 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.