Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24703 | 74332;74333;74334 | chr2:178572025;178572024;178572023 | chr2:179436752;179436751;179436750 |
N2AB | 23062 | 69409;69410;69411 | chr2:178572025;178572024;178572023 | chr2:179436752;179436751;179436750 |
N2A | 22135 | 66628;66629;66630 | chr2:178572025;178572024;178572023 | chr2:179436752;179436751;179436750 |
N2B | 15638 | 47137;47138;47139 | chr2:178572025;178572024;178572023 | chr2:179436752;179436751;179436750 |
Novex-1 | 15763 | 47512;47513;47514 | chr2:178572025;178572024;178572023 | chr2:179436752;179436751;179436750 |
Novex-2 | 15830 | 47713;47714;47715 | chr2:178572025;178572024;178572023 | chr2:179436752;179436751;179436750 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.855 | 0.434 | 0.660644780661 | gnomAD-4.0.0 | 1.36885E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5296E-05 | None | 0 | 0 | 8.99607E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7529 | likely_pathogenic | 0.7523 | pathogenic | -1.995 | Destabilizing | 0.995 | D | 0.726 | deleterious | None | None | None | None | N |
L/C | 0.869 | likely_pathogenic | 0.8742 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
L/D | 0.9892 | likely_pathogenic | 0.989 | pathogenic | -1.52 | Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
L/E | 0.9608 | likely_pathogenic | 0.96 | pathogenic | -1.35 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
L/F | 0.6342 | likely_pathogenic | 0.6136 | pathogenic | -1.035 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
L/G | 0.9251 | likely_pathogenic | 0.9214 | pathogenic | -2.492 | Highly Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
L/H | 0.9309 | likely_pathogenic | 0.9271 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/I | 0.211 | likely_benign | 0.1964 | benign | -0.613 | Destabilizing | 0.92 | D | 0.67 | prob.neutral | None | None | None | None | N |
L/K | 0.9527 | likely_pathogenic | 0.9471 | pathogenic | -1.479 | Destabilizing | 0.909 | D | 0.806 | deleterious | None | None | None | None | N |
L/M | 0.2751 | likely_benign | 0.2659 | benign | -0.669 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.464363664 | None | None | N |
L/N | 0.9317 | likely_pathogenic | 0.9283 | pathogenic | -1.623 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
L/P | 0.87 | likely_pathogenic | 0.8785 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.467700478 | None | None | N |
L/Q | 0.8666 | likely_pathogenic | 0.8582 | pathogenic | -1.534 | Destabilizing | 0.995 | D | 0.828 | deleterious | N | 0.482303335 | None | None | N |
L/R | 0.9278 | likely_pathogenic | 0.9234 | pathogenic | -1.195 | Destabilizing | 0.296 | N | 0.572 | neutral | N | 0.485835281 | None | None | N |
L/S | 0.8959 | likely_pathogenic | 0.8926 | pathogenic | -2.392 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
L/T | 0.6678 | likely_pathogenic | 0.6658 | pathogenic | -2.073 | Highly Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
L/V | 0.2403 | likely_benign | 0.2318 | benign | -1.047 | Destabilizing | 0.92 | D | 0.651 | prob.neutral | N | 0.470279423 | None | None | N |
L/W | 0.8975 | likely_pathogenic | 0.896 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/Y | 0.9251 | likely_pathogenic | 0.9186 | pathogenic | -0.987 | Destabilizing | 0.995 | D | 0.834 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.