Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24720 | 74383;74384;74385 | chr2:178571974;178571973;178571972 | chr2:179436701;179436700;179436699 |
N2AB | 23079 | 69460;69461;69462 | chr2:178571974;178571973;178571972 | chr2:179436701;179436700;179436699 |
N2A | 22152 | 66679;66680;66681 | chr2:178571974;178571973;178571972 | chr2:179436701;179436700;179436699 |
N2B | 15655 | 47188;47189;47190 | chr2:178571974;178571973;178571972 | chr2:179436701;179436700;179436699 |
Novex-1 | 15780 | 47563;47564;47565 | chr2:178571974;178571973;178571972 | chr2:179436701;179436700;179436699 |
Novex-2 | 15847 | 47764;47765;47766 | chr2:178571974;178571973;178571972 | chr2:179436701;179436700;179436699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.997 | N | 0.511 | 0.404 | 0.710867761551 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5463 | ambiguous | 0.5197 | ambiguous | -1.705 | Destabilizing | 0.992 | D | 0.436 | neutral | None | None | None | None | N |
L/C | 0.6492 | likely_pathogenic | 0.6503 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
L/D | 0.9055 | likely_pathogenic | 0.9064 | pathogenic | -1.34 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/E | 0.7468 | likely_pathogenic | 0.7452 | pathogenic | -1.211 | Destabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | N |
L/F | 0.3017 | likely_benign | 0.2699 | benign | -0.939 | Destabilizing | 0.997 | D | 0.511 | neutral | N | 0.498632478 | None | None | N |
L/G | 0.7605 | likely_pathogenic | 0.7514 | pathogenic | -2.103 | Highly Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/H | 0.4935 | ambiguous | 0.4839 | ambiguous | -1.142 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.500600409 | None | None | N |
L/I | 0.141 | likely_benign | 0.1354 | benign | -0.622 | Destabilizing | 0.978 | D | 0.36 | neutral | N | 0.486727035 | None | None | N |
L/K | 0.5514 | ambiguous | 0.5554 | ambiguous | -1.242 | Destabilizing | 0.995 | D | 0.563 | neutral | None | None | None | None | N |
L/M | 0.137 | likely_benign | 0.1329 | benign | -0.714 | Destabilizing | 0.96 | D | 0.285 | neutral | None | None | None | None | N |
L/N | 0.6379 | likely_pathogenic | 0.6367 | pathogenic | -1.423 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
L/P | 0.3986 | ambiguous | 0.384 | ambiguous | -0.958 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.508950533 | None | None | N |
L/Q | 0.4048 | ambiguous | 0.3911 | ambiguous | -1.39 | Destabilizing | 0.96 | D | 0.353 | neutral | None | None | None | None | N |
L/R | 0.4754 | ambiguous | 0.47 | ambiguous | -0.866 | Destabilizing | 0.997 | D | 0.657 | neutral | N | 0.514393639 | None | None | N |
L/S | 0.6662 | likely_pathogenic | 0.6371 | pathogenic | -2.053 | Highly Destabilizing | 0.998 | D | 0.564 | neutral | None | None | None | None | N |
L/T | 0.4657 | ambiguous | 0.4535 | ambiguous | -1.785 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
L/V | 0.1464 | likely_benign | 0.1388 | benign | -0.958 | Destabilizing | 0.978 | D | 0.373 | neutral | D | 0.524418631 | None | None | N |
L/W | 0.5557 | ambiguous | 0.5165 | ambiguous | -1.083 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
L/Y | 0.5606 | ambiguous | 0.5455 | ambiguous | -0.818 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.