Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24728 | 74407;74408;74409 | chr2:178571950;178571949;178571948 | chr2:179436677;179436676;179436675 |
N2AB | 23087 | 69484;69485;69486 | chr2:178571950;178571949;178571948 | chr2:179436677;179436676;179436675 |
N2A | 22160 | 66703;66704;66705 | chr2:178571950;178571949;178571948 | chr2:179436677;179436676;179436675 |
N2B | 15663 | 47212;47213;47214 | chr2:178571950;178571949;178571948 | chr2:179436677;179436676;179436675 |
Novex-1 | 15788 | 47587;47588;47589 | chr2:178571950;178571949;178571948 | chr2:179436677;179436676;179436675 |
Novex-2 | 15855 | 47788;47789;47790 | chr2:178571950;178571949;178571948 | chr2:179436677;179436676;179436675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1708337255 | None | 0.97 | N | 0.633 | 0.506 | 0.80197800866 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2393 | likely_benign | 0.2769 | benign | -0.942 | Destabilizing | 0.754 | D | 0.563 | neutral | None | None | None | None | I |
L/C | 0.556 | ambiguous | 0.6157 | pathogenic | -0.705 | Destabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | I |
L/D | 0.7828 | likely_pathogenic | 0.8323 | pathogenic | -0.207 | Destabilizing | 0.956 | D | 0.631 | neutral | None | None | None | None | I |
L/E | 0.4045 | ambiguous | 0.466 | ambiguous | -0.261 | Destabilizing | 0.915 | D | 0.624 | neutral | None | None | None | None | I |
L/F | 0.1849 | likely_benign | 0.2296 | benign | -0.702 | Destabilizing | 0.956 | D | 0.479 | neutral | None | None | None | None | I |
L/G | 0.601 | likely_pathogenic | 0.6533 | pathogenic | -1.17 | Destabilizing | 0.956 | D | 0.624 | neutral | None | None | None | None | I |
L/H | 0.2282 | likely_benign | 0.2846 | benign | -0.323 | Destabilizing | 0.994 | D | 0.657 | neutral | None | None | None | None | I |
L/I | 0.1317 | likely_benign | 0.1391 | benign | -0.438 | Destabilizing | 0.16 | N | 0.286 | neutral | None | None | None | None | I |
L/K | 0.1715 | likely_benign | 0.2036 | benign | -0.531 | Destabilizing | 0.043 | N | 0.483 | neutral | None | None | None | None | I |
L/M | 0.1054 | likely_benign | 0.1105 | benign | -0.458 | Destabilizing | 0.489 | N | 0.455 | neutral | D | 0.523130552 | None | None | I |
L/N | 0.4481 | ambiguous | 0.4956 | ambiguous | -0.358 | Destabilizing | 0.956 | D | 0.631 | neutral | None | None | None | None | I |
L/P | 0.233 | likely_benign | 0.2608 | benign | -0.572 | Destabilizing | 0.97 | D | 0.633 | neutral | N | 0.485959031 | None | None | I |
L/Q | 0.1219 | likely_benign | 0.1393 | benign | -0.552 | Destabilizing | 0.942 | D | 0.611 | neutral | N | 0.435836854 | None | None | I |
L/R | 0.1569 | likely_benign | 0.1921 | benign | 0.041 | Stabilizing | 0.89 | D | 0.61 | neutral | N | 0.409690403 | None | None | I |
L/S | 0.3449 | ambiguous | 0.4037 | ambiguous | -0.905 | Destabilizing | 0.956 | D | 0.545 | neutral | None | None | None | None | I |
L/T | 0.2383 | likely_benign | 0.2822 | benign | -0.843 | Destabilizing | 0.956 | D | 0.485 | neutral | None | None | None | None | I |
L/V | 0.115 | likely_benign | 0.1255 | benign | -0.572 | Destabilizing | 0.489 | N | 0.547 | neutral | N | 0.438205156 | None | None | I |
L/W | 0.3271 | likely_benign | 0.3934 | ambiguous | -0.715 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | I |
L/Y | 0.4046 | ambiguous | 0.4665 | ambiguous | -0.481 | Destabilizing | 0.993 | D | 0.503 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.