Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2474 | 7645;7646;7647 | chr2:178773636;178773635;178773634 | chr2:179638363;179638362;179638361 |
N2AB | 2474 | 7645;7646;7647 | chr2:178773636;178773635;178773634 | chr2:179638363;179638362;179638361 |
N2A | 2474 | 7645;7646;7647 | chr2:178773636;178773635;178773634 | chr2:179638363;179638362;179638361 |
N2B | 2428 | 7507;7508;7509 | chr2:178773636;178773635;178773634 | chr2:179638363;179638362;179638361 |
Novex-1 | 2428 | 7507;7508;7509 | chr2:178773636;178773635;178773634 | chr2:179638363;179638362;179638361 |
Novex-2 | 2428 | 7507;7508;7509 | chr2:178773636;178773635;178773634 | chr2:179638363;179638362;179638361 |
Novex-3 | 2474 | 7645;7646;7647 | chr2:178773636;178773635;178773634 | chr2:179638363;179638362;179638361 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs750891001 | -0.038 | None | N | 0.118 | 0.067 | 0.143124449307 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.83E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0965 | likely_benign | 0.0933 | benign | -0.167 | Destabilizing | None | N | 0.116 | neutral | N | 0.412745142 | None | None | I |
T/C | 0.4915 | ambiguous | 0.4635 | ambiguous | -0.56 | Destabilizing | 0.667 | D | 0.381 | neutral | None | None | None | None | I |
T/D | 0.5309 | ambiguous | 0.5177 | ambiguous | -0.112 | Destabilizing | 0.22 | N | 0.341 | neutral | None | None | None | None | I |
T/E | 0.5045 | ambiguous | 0.4902 | ambiguous | -0.2 | Destabilizing | 0.055 | N | 0.305 | neutral | None | None | None | None | I |
T/F | 0.3931 | ambiguous | 0.3616 | ambiguous | -0.866 | Destabilizing | 0.667 | D | 0.387 | neutral | None | None | None | None | I |
T/G | 0.2516 | likely_benign | 0.2403 | benign | -0.2 | Destabilizing | 0.055 | N | 0.239 | neutral | None | None | None | None | I |
T/H | 0.3485 | ambiguous | 0.3341 | benign | -0.29 | Destabilizing | 0.667 | D | 0.342 | neutral | None | None | None | None | I |
T/I | 0.2943 | likely_benign | 0.2756 | benign | -0.199 | Destabilizing | 0.003 | N | 0.217 | neutral | N | 0.507691084 | None | None | I |
T/K | 0.3602 | ambiguous | 0.3626 | ambiguous | -0.363 | Destabilizing | 0.055 | N | 0.312 | neutral | None | None | None | None | I |
T/L | 0.1441 | likely_benign | 0.1365 | benign | -0.199 | Destabilizing | 0.055 | N | 0.259 | neutral | None | None | None | None | I |
T/M | 0.1306 | likely_benign | 0.1212 | benign | -0.32 | Destabilizing | 0.667 | D | 0.378 | neutral | None | None | None | None | I |
T/N | 0.142 | likely_benign | 0.1371 | benign | -0.271 | Destabilizing | 0.096 | N | 0.279 | neutral | D | 0.548972229 | None | None | I |
T/P | 0.1183 | likely_benign | 0.1183 | benign | -0.167 | Destabilizing | 0.301 | N | 0.427 | neutral | N | 0.358164047 | None | None | I |
T/Q | 0.325 | likely_benign | 0.3197 | benign | -0.431 | Destabilizing | 0.22 | N | 0.429 | neutral | None | None | None | None | I |
T/R | 0.3401 | ambiguous | 0.334 | benign | -0.087 | Destabilizing | 0.001 | N | 0.214 | neutral | None | None | None | None | I |
T/S | 0.1037 | likely_benign | 0.1007 | benign | -0.409 | Destabilizing | None | N | 0.118 | neutral | N | 0.471936404 | None | None | I |
T/V | 0.2088 | likely_benign | 0.196 | benign | -0.167 | Destabilizing | 0.055 | N | 0.227 | neutral | None | None | None | None | I |
T/W | 0.7672 | likely_pathogenic | 0.746 | pathogenic | -0.984 | Destabilizing | 0.958 | D | 0.327 | neutral | None | None | None | None | I |
T/Y | 0.4117 | ambiguous | 0.3958 | ambiguous | -0.656 | Destabilizing | 0.667 | D | 0.369 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.