Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24745 | 74458;74459;74460 | chr2:178571899;178571898;178571897 | chr2:179436626;179436625;179436624 |
N2AB | 23104 | 69535;69536;69537 | chr2:178571899;178571898;178571897 | chr2:179436626;179436625;179436624 |
N2A | 22177 | 66754;66755;66756 | chr2:178571899;178571898;178571897 | chr2:179436626;179436625;179436624 |
N2B | 15680 | 47263;47264;47265 | chr2:178571899;178571898;178571897 | chr2:179436626;179436625;179436624 |
Novex-1 | 15805 | 47638;47639;47640 | chr2:178571899;178571898;178571897 | chr2:179436626;179436625;179436624 |
Novex-2 | 15872 | 47839;47840;47841 | chr2:178571899;178571898;178571897 | chr2:179436626;179436625;179436624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1708317889 | None | 0.956 | D | 0.589 | 0.523 | 0.483521307902 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2133 | likely_benign | 0.1978 | benign | -1.931 | Destabilizing | 0.198 | N | 0.375 | neutral | N | 0.513989526 | None | None | N |
P/C | 0.8635 | likely_pathogenic | 0.8766 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/D | 0.9957 | likely_pathogenic | 0.9962 | pathogenic | -2.314 | Highly Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
P/E | 0.9842 | likely_pathogenic | 0.987 | pathogenic | -2.204 | Highly Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
P/F | 0.9919 | likely_pathogenic | 0.9921 | pathogenic | -1.343 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
P/G | 0.8819 | likely_pathogenic | 0.8753 | pathogenic | -2.356 | Highly Destabilizing | 0.967 | D | 0.59 | neutral | None | None | None | None | N |
P/H | 0.9793 | likely_pathogenic | 0.9815 | pathogenic | -1.952 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
P/I | 0.8719 | likely_pathogenic | 0.8737 | pathogenic | -0.797 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
P/K | 0.9889 | likely_pathogenic | 0.9902 | pathogenic | -1.484 | Destabilizing | 0.995 | D | 0.682 | prob.neutral | None | None | None | None | N |
P/L | 0.7455 | likely_pathogenic | 0.7378 | pathogenic | -0.797 | Destabilizing | 0.978 | D | 0.709 | prob.delet. | D | 0.548459608 | None | None | N |
P/M | 0.9337 | likely_pathogenic | 0.9337 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
P/N | 0.9892 | likely_pathogenic | 0.9905 | pathogenic | -1.575 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
P/Q | 0.9637 | likely_pathogenic | 0.9669 | pathogenic | -1.619 | Destabilizing | 0.999 | D | 0.674 | neutral | D | 0.575899614 | None | None | N |
P/R | 0.9701 | likely_pathogenic | 0.9718 | pathogenic | -1.159 | Destabilizing | 0.997 | D | 0.709 | prob.delet. | D | 0.575899614 | None | None | N |
P/S | 0.7912 | likely_pathogenic | 0.7864 | pathogenic | -2.174 | Highly Destabilizing | 0.956 | D | 0.589 | neutral | D | 0.545767491 | None | None | N |
P/T | 0.738 | likely_pathogenic | 0.7535 | pathogenic | -1.938 | Destabilizing | 0.978 | D | 0.663 | neutral | D | 0.55251544 | None | None | N |
P/V | 0.6931 | likely_pathogenic | 0.6907 | pathogenic | -1.145 | Destabilizing | 0.983 | D | 0.658 | neutral | None | None | None | None | N |
P/W | 0.9977 | likely_pathogenic | 0.9978 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/Y | 0.9931 | likely_pathogenic | 0.9935 | pathogenic | -1.331 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.