Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24759 | 74500;74501;74502 | chr2:178571857;178571856;178571855 | chr2:179436584;179436583;179436582 |
N2AB | 23118 | 69577;69578;69579 | chr2:178571857;178571856;178571855 | chr2:179436584;179436583;179436582 |
N2A | 22191 | 66796;66797;66798 | chr2:178571857;178571856;178571855 | chr2:179436584;179436583;179436582 |
N2B | 15694 | 47305;47306;47307 | chr2:178571857;178571856;178571855 | chr2:179436584;179436583;179436582 |
Novex-1 | 15819 | 47680;47681;47682 | chr2:178571857;178571856;178571855 | chr2:179436584;179436583;179436582 |
Novex-2 | 15886 | 47881;47882;47883 | chr2:178571857;178571856;178571855 | chr2:179436584;179436583;179436582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1421105301 | 0.051 | 0.994 | N | 0.689 | 0.45 | 0.412980791724 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/I | rs1421105301 | 0.051 | 0.994 | N | 0.689 | 0.45 | 0.412980791724 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85932E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.689 | likely_pathogenic | 0.6693 | pathogenic | -0.476 | Destabilizing | 0.825 | D | 0.441 | neutral | N | 0.457969839 | None | None | N |
T/C | 0.9571 | likely_pathogenic | 0.9528 | pathogenic | -0.257 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/D | 0.7696 | likely_pathogenic | 0.7939 | pathogenic | -0.035 | Destabilizing | 0.991 | D | 0.669 | neutral | None | None | None | None | N |
T/E | 0.9197 | likely_pathogenic | 0.9133 | pathogenic | -0.107 | Destabilizing | 0.991 | D | 0.661 | neutral | None | None | None | None | N |
T/F | 0.947 | likely_pathogenic | 0.9416 | pathogenic | -0.868 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
T/G | 0.6934 | likely_pathogenic | 0.7008 | pathogenic | -0.632 | Destabilizing | 0.938 | D | 0.586 | neutral | None | None | None | None | N |
T/H | 0.8495 | likely_pathogenic | 0.8471 | pathogenic | -0.977 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/I | 0.9476 | likely_pathogenic | 0.9378 | pathogenic | -0.178 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | N | 0.468707488 | None | None | N |
T/K | 0.8723 | likely_pathogenic | 0.8645 | pathogenic | -0.56 | Destabilizing | 0.988 | D | 0.67 | neutral | N | 0.45071491 | None | None | N |
T/L | 0.7129 | likely_pathogenic | 0.682 | pathogenic | -0.178 | Destabilizing | 0.968 | D | 0.571 | neutral | None | None | None | None | N |
T/M | 0.5019 | ambiguous | 0.4624 | ambiguous | 0.104 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
T/N | 0.4313 | ambiguous | 0.4435 | ambiguous | -0.291 | Destabilizing | 0.991 | D | 0.658 | neutral | None | None | None | None | N |
T/P | 0.8591 | likely_pathogenic | 0.8608 | pathogenic | -0.248 | Destabilizing | 0.994 | D | 0.681 | prob.neutral | N | 0.454615704 | None | None | N |
T/Q | 0.8657 | likely_pathogenic | 0.8546 | pathogenic | -0.548 | Destabilizing | 0.991 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/R | 0.8728 | likely_pathogenic | 0.8617 | pathogenic | -0.261 | Destabilizing | 0.988 | D | 0.676 | prob.neutral | N | 0.457324729 | None | None | N |
T/S | 0.378 | ambiguous | 0.3912 | ambiguous | -0.501 | Destabilizing | 0.234 | N | 0.301 | neutral | N | 0.437502496 | None | None | N |
T/V | 0.877 | likely_pathogenic | 0.8591 | pathogenic | -0.248 | Destabilizing | 0.968 | D | 0.521 | neutral | None | None | None | None | N |
T/W | 0.9828 | likely_pathogenic | 0.9817 | pathogenic | -0.847 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
T/Y | 0.9261 | likely_pathogenic | 0.921 | pathogenic | -0.597 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.