Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24789 | 74590;74591;74592 | chr2:178571767;178571766;178571765 | chr2:179436494;179436493;179436492 |
N2AB | 23148 | 69667;69668;69669 | chr2:178571767;178571766;178571765 | chr2:179436494;179436493;179436492 |
N2A | 22221 | 66886;66887;66888 | chr2:178571767;178571766;178571765 | chr2:179436494;179436493;179436492 |
N2B | 15724 | 47395;47396;47397 | chr2:178571767;178571766;178571765 | chr2:179436494;179436493;179436492 |
Novex-1 | 15849 | 47770;47771;47772 | chr2:178571767;178571766;178571765 | chr2:179436494;179436493;179436492 |
Novex-2 | 15916 | 47971;47972;47973 | chr2:178571767;178571766;178571765 | chr2:179436494;179436493;179436492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs374382352 | -0.884 | 0.892 | N | 0.573 | 0.396 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3105 | likely_benign | 0.3127 | benign | -0.907 | Destabilizing | 0.845 | D | 0.618 | neutral | None | None | None | None | N |
K/C | 0.5041 | ambiguous | 0.5205 | ambiguous | -1.099 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
K/D | 0.6345 | likely_pathogenic | 0.644 | pathogenic | -1.237 | Destabilizing | 0.975 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/E | 0.1774 | likely_benign | 0.1744 | benign | -1.03 | Destabilizing | 0.892 | D | 0.573 | neutral | N | 0.472376445 | None | None | N |
K/F | 0.6794 | likely_pathogenic | 0.6891 | pathogenic | -0.273 | Destabilizing | 0.987 | D | 0.788 | deleterious | None | None | None | None | N |
K/G | 0.4993 | ambiguous | 0.5009 | ambiguous | -1.355 | Destabilizing | 0.916 | D | 0.712 | prob.delet. | None | None | None | None | N |
K/H | 0.1949 | likely_benign | 0.197 | benign | -1.715 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/I | 0.2629 | likely_benign | 0.2628 | benign | 0.313 | Stabilizing | 0.967 | D | 0.767 | deleterious | N | 0.433551485 | None | None | N |
K/L | 0.2846 | likely_benign | 0.2826 | benign | 0.313 | Stabilizing | 0.845 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/M | 0.1738 | likely_benign | 0.1749 | benign | 0.06 | Stabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/N | 0.3342 | likely_benign | 0.3446 | ambiguous | -1.392 | Destabilizing | 0.967 | D | 0.627 | neutral | N | 0.513108346 | None | None | N |
K/P | 0.9442 | likely_pathogenic | 0.946 | pathogenic | -0.066 | Destabilizing | 0.987 | D | 0.749 | deleterious | None | None | None | None | N |
K/Q | 0.1097 | likely_benign | 0.1079 | benign | -1.221 | Destabilizing | 0.983 | D | 0.661 | neutral | N | 0.517300658 | None | None | N |
K/R | 0.0842 | likely_benign | 0.0834 | benign | -1.182 | Destabilizing | 0.892 | D | 0.547 | neutral | N | 0.479110416 | None | None | N |
K/S | 0.288 | likely_benign | 0.2957 | benign | -1.897 | Destabilizing | 0.845 | D | 0.589 | neutral | None | None | None | None | N |
K/T | 0.0975 | likely_benign | 0.0973 | benign | -1.462 | Destabilizing | 0.025 | N | 0.401 | neutral | N | 0.388893843 | None | None | N |
K/V | 0.2511 | likely_benign | 0.2473 | benign | -0.066 | Destabilizing | 0.845 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/W | 0.7168 | likely_pathogenic | 0.7373 | pathogenic | -0.331 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/Y | 0.5333 | ambiguous | 0.5415 | ambiguous | 0.024 | Stabilizing | 0.996 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.