Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24820 | 74683;74684;74685 | chr2:178571674;178571673;178571672 | chr2:179436401;179436400;179436399 |
N2AB | 23179 | 69760;69761;69762 | chr2:178571674;178571673;178571672 | chr2:179436401;179436400;179436399 |
N2A | 22252 | 66979;66980;66981 | chr2:178571674;178571673;178571672 | chr2:179436401;179436400;179436399 |
N2B | 15755 | 47488;47489;47490 | chr2:178571674;178571673;178571672 | chr2:179436401;179436400;179436399 |
Novex-1 | 15880 | 47863;47864;47865 | chr2:178571674;178571673;178571672 | chr2:179436401;179436400;179436399 |
Novex-2 | 15947 | 48064;48065;48066 | chr2:178571674;178571673;178571672 | chr2:179436401;179436400;179436399 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.983 | N | 0.58 | 0.284 | 0.338834610459 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.264 | likely_benign | 0.2291 | benign | -0.535 | Destabilizing | 0.892 | D | 0.575 | neutral | N | 0.472204932 | None | None | N |
E/C | 0.9037 | likely_pathogenic | 0.8812 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
E/D | 0.1301 | likely_benign | 0.1096 | benign | -0.503 | Destabilizing | 0.011 | N | 0.134 | neutral | N | 0.460606721 | None | None | N |
E/F | 0.8767 | likely_pathogenic | 0.8488 | pathogenic | -0.429 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
E/G | 0.3866 | ambiguous | 0.3193 | benign | -0.773 | Destabilizing | 0.892 | D | 0.539 | neutral | N | 0.467204956 | None | None | N |
E/H | 0.6532 | likely_pathogenic | 0.6073 | pathogenic | -0.463 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
E/I | 0.612 | likely_pathogenic | 0.5761 | pathogenic | 0.069 | Stabilizing | 0.987 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/K | 0.3484 | ambiguous | 0.3177 | benign | 0.089 | Stabilizing | 0.892 | D | 0.505 | neutral | N | 0.521868611 | None | None | N |
E/L | 0.6748 | likely_pathogenic | 0.6229 | pathogenic | 0.069 | Stabilizing | 0.987 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/M | 0.6309 | likely_pathogenic | 0.5956 | pathogenic | 0.345 | Stabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
E/N | 0.3598 | ambiguous | 0.2901 | benign | -0.2 | Destabilizing | 0.95 | D | 0.591 | neutral | None | None | None | None | N |
E/P | 0.9854 | likely_pathogenic | 0.9706 | pathogenic | -0.112 | Destabilizing | 0.987 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/Q | 0.2912 | likely_benign | 0.264 | benign | -0.156 | Destabilizing | 0.983 | D | 0.58 | neutral | N | 0.48319607 | None | None | N |
E/R | 0.5335 | ambiguous | 0.4862 | ambiguous | 0.238 | Stabilizing | 0.987 | D | 0.642 | neutral | None | None | None | None | N |
E/S | 0.3018 | likely_benign | 0.2523 | benign | -0.396 | Destabilizing | 0.916 | D | 0.507 | neutral | None | None | None | None | N |
E/T | 0.3457 | ambiguous | 0.3064 | benign | -0.208 | Destabilizing | 0.975 | D | 0.624 | neutral | None | None | None | None | N |
E/V | 0.4019 | ambiguous | 0.3728 | ambiguous | -0.112 | Destabilizing | 0.983 | D | 0.647 | neutral | N | 0.499325316 | None | None | N |
E/W | 0.9632 | likely_pathogenic | 0.9516 | pathogenic | -0.279 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
E/Y | 0.7798 | likely_pathogenic | 0.7312 | pathogenic | -0.195 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.