Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24834 | 74725;74726;74727 | chr2:178571632;178571631;178571630 | chr2:179436359;179436358;179436357 |
N2AB | 23193 | 69802;69803;69804 | chr2:178571632;178571631;178571630 | chr2:179436359;179436358;179436357 |
N2A | 22266 | 67021;67022;67023 | chr2:178571632;178571631;178571630 | chr2:179436359;179436358;179436357 |
N2B | 15769 | 47530;47531;47532 | chr2:178571632;178571631;178571630 | chr2:179436359;179436358;179436357 |
Novex-1 | 15894 | 47905;47906;47907 | chr2:178571632;178571631;178571630 | chr2:179436359;179436358;179436357 |
Novex-2 | 15961 | 48106;48107;48108 | chr2:178571632;178571631;178571630 | chr2:179436359;179436358;179436357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.684 | N | 0.375 | 0.129 | 0.270889551736 | gnomAD-4.0.0 | 8.40225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.18751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1212 | likely_benign | 0.12 | benign | 0.052 | Stabilizing | 0.543 | D | 0.341 | neutral | None | None | None | None | N |
K/C | 0.4756 | ambiguous | 0.447 | ambiguous | -0.4 | Destabilizing | 0.996 | D | 0.289 | neutral | None | None | None | None | N |
K/D | 0.2414 | likely_benign | 0.2368 | benign | -0.208 | Destabilizing | 0.009 | N | 0.19 | neutral | None | None | None | None | N |
K/E | 0.0771 | likely_benign | 0.0738 | benign | -0.216 | Destabilizing | 0.001 | N | 0.088 | neutral | N | 0.412314129 | None | None | N |
K/F | 0.5519 | ambiguous | 0.5108 | ambiguous | -0.245 | Destabilizing | 0.984 | D | 0.297 | neutral | None | None | None | None | N |
K/G | 0.2466 | likely_benign | 0.234 | benign | -0.094 | Destabilizing | 0.742 | D | 0.393 | neutral | None | None | None | None | N |
K/H | 0.2424 | likely_benign | 0.2334 | benign | -0.201 | Destabilizing | 0.953 | D | 0.318 | neutral | None | None | None | None | N |
K/I | 0.1359 | likely_benign | 0.1315 | benign | 0.351 | Stabilizing | 0.953 | D | 0.336 | neutral | None | None | None | None | N |
K/L | 0.1493 | likely_benign | 0.1411 | benign | 0.351 | Stabilizing | 0.742 | D | 0.413 | neutral | None | None | None | None | N |
K/M | 0.1306 | likely_benign | 0.1255 | benign | -0.021 | Destabilizing | 0.994 | D | 0.315 | neutral | N | 0.475157901 | None | None | N |
K/N | 0.2131 | likely_benign | 0.2051 | benign | 0.063 | Stabilizing | 0.521 | D | 0.339 | neutral | N | 0.509035386 | None | None | N |
K/P | 0.4111 | ambiguous | 0.3901 | ambiguous | 0.276 | Stabilizing | 0.953 | D | 0.369 | neutral | None | None | None | None | N |
K/Q | 0.0901 | likely_benign | 0.0872 | benign | -0.085 | Destabilizing | 0.078 | N | 0.207 | neutral | N | 0.468188841 | None | None | N |
K/R | 0.0859 | likely_benign | 0.0833 | benign | -0.062 | Destabilizing | 0.684 | D | 0.375 | neutral | N | 0.483926298 | None | None | N |
K/S | 0.1805 | likely_benign | 0.1708 | benign | -0.32 | Destabilizing | 0.543 | D | 0.329 | neutral | None | None | None | None | N |
K/T | 0.0889 | likely_benign | 0.0881 | benign | -0.204 | Destabilizing | 0.684 | D | 0.376 | neutral | N | 0.460588078 | None | None | N |
K/V | 0.1128 | likely_benign | 0.1108 | benign | 0.276 | Stabilizing | 0.854 | D | 0.374 | neutral | None | None | None | None | N |
K/W | 0.6829 | likely_pathogenic | 0.6532 | pathogenic | -0.332 | Destabilizing | 0.996 | D | 0.361 | neutral | None | None | None | None | N |
K/Y | 0.4451 | ambiguous | 0.4277 | ambiguous | 0.023 | Stabilizing | 0.984 | D | 0.335 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.