Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24842 | 74749;74750;74751 | chr2:178571608;178571607;178571606 | chr2:179436335;179436334;179436333 |
N2AB | 23201 | 69826;69827;69828 | chr2:178571608;178571607;178571606 | chr2:179436335;179436334;179436333 |
N2A | 22274 | 67045;67046;67047 | chr2:178571608;178571607;178571606 | chr2:179436335;179436334;179436333 |
N2B | 15777 | 47554;47555;47556 | chr2:178571608;178571607;178571606 | chr2:179436335;179436334;179436333 |
Novex-1 | 15902 | 47929;47930;47931 | chr2:178571608;178571607;178571606 | chr2:179436335;179436334;179436333 |
Novex-2 | 15969 | 48130;48131;48132 | chr2:178571608;178571607;178571606 | chr2:179436335;179436334;179436333 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1708221113 | None | 0.822 | N | 0.519 | 0.227 | 0.200317383148 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
N/D | rs1708221113 | None | 0.822 | N | 0.519 | 0.227 | 0.200317383148 | gnomAD-4.0.0 | 2.56389E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.14179E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4383 | ambiguous | 0.42 | ambiguous | -0.455 | Destabilizing | 0.754 | D | 0.625 | neutral | None | None | None | None | I |
N/C | 0.3769 | ambiguous | 0.3729 | ambiguous | 0.381 | Stabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | I |
N/D | 0.5334 | ambiguous | 0.5277 | ambiguous | -0.229 | Destabilizing | 0.822 | D | 0.519 | neutral | N | 0.442575534 | None | None | I |
N/E | 0.8673 | likely_pathogenic | 0.8591 | pathogenic | -0.264 | Destabilizing | 0.86 | D | 0.512 | neutral | None | None | None | None | I |
N/F | 0.8495 | likely_pathogenic | 0.8238 | pathogenic | -0.796 | Destabilizing | 0.956 | D | 0.738 | prob.delet. | None | None | None | None | I |
N/G | 0.436 | ambiguous | 0.4044 | ambiguous | -0.639 | Destabilizing | 0.754 | D | 0.529 | neutral | None | None | None | None | I |
N/H | 0.2388 | likely_benign | 0.2218 | benign | -0.707 | Destabilizing | 0.99 | D | 0.56 | neutral | N | 0.512496979 | None | None | I |
N/I | 0.4786 | ambiguous | 0.4563 | ambiguous | -0.053 | Destabilizing | 0.032 | N | 0.473 | neutral | N | 0.433150761 | None | None | I |
N/K | 0.7714 | likely_pathogenic | 0.7439 | pathogenic | 0.012 | Stabilizing | 0.822 | D | 0.523 | neutral | N | 0.454275395 | None | None | I |
N/L | 0.4103 | ambiguous | 0.3765 | ambiguous | -0.053 | Destabilizing | 0.514 | D | 0.622 | neutral | None | None | None | None | I |
N/M | 0.5742 | likely_pathogenic | 0.5208 | ambiguous | 0.506 | Stabilizing | 0.988 | D | 0.719 | prob.delet. | None | None | None | None | I |
N/P | 0.9214 | likely_pathogenic | 0.9168 | pathogenic | -0.161 | Destabilizing | 0.978 | D | 0.72 | prob.delet. | None | None | None | None | I |
N/Q | 0.6803 | likely_pathogenic | 0.6537 | pathogenic | -0.521 | Destabilizing | 0.978 | D | 0.557 | neutral | None | None | None | None | I |
N/R | 0.766 | likely_pathogenic | 0.7417 | pathogenic | 0.125 | Stabilizing | 0.956 | D | 0.545 | neutral | None | None | None | None | I |
N/S | 0.0765 | likely_benign | 0.0747 | benign | -0.216 | Destabilizing | 0.058 | N | 0.151 | neutral | N | 0.377161405 | None | None | I |
N/T | 0.1336 | likely_benign | 0.125 | benign | -0.11 | Destabilizing | 0.698 | D | 0.5 | neutral | N | 0.383257871 | None | None | I |
N/V | 0.4702 | ambiguous | 0.4438 | ambiguous | -0.161 | Destabilizing | 0.514 | D | 0.623 | neutral | None | None | None | None | I |
N/W | 0.937 | likely_pathogenic | 0.93 | pathogenic | -0.735 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | I |
N/Y | 0.4304 | ambiguous | 0.409 | ambiguous | -0.489 | Destabilizing | 0.97 | D | 0.719 | prob.delet. | N | 0.469558359 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.