Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24867 | 74824;74825;74826 | chr2:178571533;178571532;178571531 | chr2:179436260;179436259;179436258 |
N2AB | 23226 | 69901;69902;69903 | chr2:178571533;178571532;178571531 | chr2:179436260;179436259;179436258 |
N2A | 22299 | 67120;67121;67122 | chr2:178571533;178571532;178571531 | chr2:179436260;179436259;179436258 |
N2B | 15802 | 47629;47630;47631 | chr2:178571533;178571532;178571531 | chr2:179436260;179436259;179436258 |
Novex-1 | 15927 | 48004;48005;48006 | chr2:178571533;178571532;178571531 | chr2:179436260;179436259;179436258 |
Novex-2 | 15994 | 48205;48206;48207 | chr2:178571533;178571532;178571531 | chr2:179436260;179436259;179436258 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.988 | D | 0.723 | 0.353 | 0.625243557465 | gnomAD-4.0.0 | 1.203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31565E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1165 | likely_benign | 0.1065 | benign | -0.972 | Destabilizing | 0.825 | D | 0.483 | neutral | N | 0.506976516 | None | None | N |
T/C | 0.5281 | ambiguous | 0.4484 | ambiguous | -0.508 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
T/D | 0.7309 | likely_pathogenic | 0.6808 | pathogenic | -0.309 | Destabilizing | 0.991 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/E | 0.5768 | likely_pathogenic | 0.5283 | ambiguous | -0.192 | Destabilizing | 0.991 | D | 0.672 | neutral | None | None | None | None | N |
T/F | 0.4384 | ambiguous | 0.3671 | ambiguous | -0.778 | Destabilizing | 0.995 | D | 0.792 | deleterious | None | None | None | None | N |
T/G | 0.4081 | ambiguous | 0.3608 | ambiguous | -1.338 | Destabilizing | 0.938 | D | 0.583 | neutral | None | None | None | None | N |
T/H | 0.4198 | ambiguous | 0.3667 | ambiguous | -1.429 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
T/I | 0.332 | likely_benign | 0.2361 | benign | -0.049 | Destabilizing | 0.994 | D | 0.721 | prob.delet. | N | 0.484374612 | None | None | N |
T/K | 0.3966 | ambiguous | 0.3654 | ambiguous | -0.445 | Destabilizing | 0.988 | D | 0.679 | prob.neutral | N | 0.521695252 | None | None | N |
T/L | 0.1812 | likely_benign | 0.1493 | benign | -0.049 | Destabilizing | 0.968 | D | 0.593 | neutral | None | None | None | None | N |
T/M | 0.115 | likely_benign | 0.1 | benign | 0.014 | Stabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
T/N | 0.2196 | likely_benign | 0.1881 | benign | -0.757 | Destabilizing | 0.991 | D | 0.672 | neutral | None | None | None | None | N |
T/P | 0.8861 | likely_pathogenic | 0.8701 | pathogenic | -0.323 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | N | 0.476385668 | None | None | N |
T/Q | 0.3275 | likely_benign | 0.3026 | benign | -0.671 | Destabilizing | 0.991 | D | 0.758 | deleterious | None | None | None | None | N |
T/R | 0.3614 | ambiguous | 0.3244 | benign | -0.47 | Destabilizing | 0.988 | D | 0.723 | prob.delet. | D | 0.522540614 | None | None | N |
T/S | 0.1348 | likely_benign | 0.1194 | benign | -1.105 | Destabilizing | 0.234 | N | 0.435 | neutral | N | 0.440922095 | None | None | N |
T/V | 0.1877 | likely_benign | 0.1467 | benign | -0.323 | Destabilizing | 0.968 | D | 0.554 | neutral | None | None | None | None | N |
T/W | 0.8247 | likely_pathogenic | 0.7758 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/Y | 0.5048 | ambiguous | 0.4457 | ambiguous | -0.483 | Destabilizing | 0.998 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.