Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24900 | 74923;74924;74925 | chr2:178571434;178571433;178571432 | chr2:179436161;179436160;179436159 |
N2AB | 23259 | 70000;70001;70002 | chr2:178571434;178571433;178571432 | chr2:179436161;179436160;179436159 |
N2A | 22332 | 67219;67220;67221 | chr2:178571434;178571433;178571432 | chr2:179436161;179436160;179436159 |
N2B | 15835 | 47728;47729;47730 | chr2:178571434;178571433;178571432 | chr2:179436161;179436160;179436159 |
Novex-1 | 15960 | 48103;48104;48105 | chr2:178571434;178571433;178571432 | chr2:179436161;179436160;179436159 |
Novex-2 | 16027 | 48304;48305;48306 | chr2:178571434;178571433;178571432 | chr2:179436161;179436160;179436159 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.001 | N | 0.201 | 0.116 | 0.0297737177859 | gnomAD-4.0.0 | 1.59189E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0705 | likely_benign | 0.0716 | benign | -0.769 | Destabilizing | 0.001 | N | 0.201 | neutral | N | 0.428587516 | None | None | N |
T/C | 0.1972 | likely_benign | 0.2028 | benign | -0.567 | Destabilizing | 0.204 | N | 0.315 | neutral | None | None | None | None | N |
T/D | 0.5269 | ambiguous | 0.538 | ambiguous | -0.469 | Destabilizing | 0.068 | N | 0.456 | neutral | None | None | None | None | N |
T/E | 0.2596 | likely_benign | 0.2657 | benign | -0.363 | Destabilizing | 0.068 | N | 0.371 | neutral | None | None | None | None | N |
T/F | 0.1336 | likely_benign | 0.1462 | benign | -0.592 | Destabilizing | 0.035 | N | 0.543 | neutral | None | None | None | None | N |
T/G | 0.2928 | likely_benign | 0.2967 | benign | -1.119 | Destabilizing | 0.029 | N | 0.355 | neutral | None | None | None | None | N |
T/H | 0.2414 | likely_benign | 0.2426 | benign | -1.216 | Destabilizing | 0.439 | N | 0.484 | neutral | None | None | None | None | N |
T/I | 0.0434 | likely_benign | 0.0462 | benign | 0.105 | Stabilizing | None | N | 0.098 | neutral | N | 0.307874678 | None | None | N |
T/K | 0.179 | likely_benign | 0.1763 | benign | -0.655 | Destabilizing | 0.068 | N | 0.369 | neutral | None | None | None | None | N |
T/L | 0.0542 | likely_benign | 0.0567 | benign | 0.105 | Stabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
T/M | 0.0551 | likely_benign | 0.0587 | benign | 0.06 | Stabilizing | 0.035 | N | 0.507 | neutral | None | None | None | None | N |
T/N | 0.1996 | likely_benign | 0.2149 | benign | -0.968 | Destabilizing | 0.144 | N | 0.343 | neutral | N | 0.473341158 | None | None | N |
T/P | 0.6443 | likely_pathogenic | 0.6665 | pathogenic | -0.153 | Destabilizing | 0.052 | N | 0.459 | neutral | N | 0.473341158 | None | None | N |
T/Q | 0.1951 | likely_benign | 0.1929 | benign | -0.861 | Destabilizing | 0.439 | N | 0.493 | neutral | None | None | None | None | N |
T/R | 0.1481 | likely_benign | 0.1381 | benign | -0.627 | Destabilizing | 0.068 | N | 0.477 | neutral | None | None | None | None | N |
T/S | 0.1289 | likely_benign | 0.1328 | benign | -1.233 | Destabilizing | 0.011 | N | 0.185 | neutral | N | 0.471260858 | None | None | N |
T/V | 0.0395 | likely_benign | 0.0409 | benign | -0.153 | Destabilizing | None | N | 0.07 | neutral | None | None | None | None | N |
T/W | 0.5262 | ambiguous | 0.5528 | ambiguous | -0.677 | Destabilizing | 0.747 | D | 0.508 | neutral | None | None | None | None | N |
T/Y | 0.224 | likely_benign | 0.2381 | benign | -0.36 | Destabilizing | 0.068 | N | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.