Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24919 | 74980;74981;74982 | chr2:178571377;178571376;178571375 | chr2:179436104;179436103;179436102 |
N2AB | 23278 | 70057;70058;70059 | chr2:178571377;178571376;178571375 | chr2:179436104;179436103;179436102 |
N2A | 22351 | 67276;67277;67278 | chr2:178571377;178571376;178571375 | chr2:179436104;179436103;179436102 |
N2B | 15854 | 47785;47786;47787 | chr2:178571377;178571376;178571375 | chr2:179436104;179436103;179436102 |
Novex-1 | 15979 | 48160;48161;48162 | chr2:178571377;178571376;178571375 | chr2:179436104;179436103;179436102 |
Novex-2 | 16046 | 48361;48362;48363 | chr2:178571377;178571376;178571375 | chr2:179436104;179436103;179436102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.004 | N | 0.163 | 0.067 | 0.199424873507 | gnomAD-4.0.0 | 3.60099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93753E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0595 | likely_benign | 0.0622 | benign | -0.603 | Destabilizing | None | N | 0.083 | neutral | None | None | None | None | N |
L/C | 0.1422 | likely_benign | 0.1395 | benign | -0.68 | Destabilizing | 0.54 | D | 0.215 | neutral | None | None | None | None | N |
L/D | 0.2098 | likely_benign | 0.1885 | benign | 0.137 | Stabilizing | 0.033 | N | 0.322 | neutral | None | None | None | None | N |
L/E | 0.1421 | likely_benign | 0.1348 | benign | 0.056 | Stabilizing | None | N | 0.187 | neutral | None | None | None | None | N |
L/F | 0.0555 | likely_benign | 0.0532 | benign | -0.532 | Destabilizing | 0.001 | N | 0.134 | neutral | None | None | None | None | N |
L/G | 0.1486 | likely_benign | 0.1458 | benign | -0.774 | Destabilizing | 0.033 | N | 0.322 | neutral | None | None | None | None | N |
L/H | 0.0626 | likely_benign | 0.0643 | benign | -0.029 | Destabilizing | None | N | 0.191 | neutral | None | None | None | None | N |
L/I | 0.0566 | likely_benign | 0.0556 | benign | -0.277 | Destabilizing | 0.001 | N | 0.109 | neutral | None | None | None | None | N |
L/K | 0.0966 | likely_benign | 0.1017 | benign | -0.269 | Destabilizing | 0.033 | N | 0.297 | neutral | None | None | None | None | N |
L/M | 0.0647 | likely_benign | 0.0684 | benign | -0.374 | Destabilizing | 0.304 | N | 0.233 | neutral | N | 0.443829114 | None | None | N |
L/N | 0.0855 | likely_benign | 0.087 | benign | -0.1 | Destabilizing | 0.001 | N | 0.201 | neutral | None | None | None | None | N |
L/P | 0.6364 | likely_pathogenic | 0.5466 | ambiguous | -0.352 | Destabilizing | 0.202 | N | 0.407 | neutral | N | 0.434630841 | None | None | N |
L/Q | 0.0646 | likely_benign | 0.0678 | benign | -0.295 | Destabilizing | 0.059 | N | 0.37 | neutral | N | 0.414506285 | None | None | N |
L/R | 0.0759 | likely_benign | 0.0774 | benign | 0.237 | Stabilizing | 0.111 | N | 0.399 | neutral | N | 0.383530017 | None | None | N |
L/S | 0.0643 | likely_benign | 0.0652 | benign | -0.621 | Destabilizing | 0.003 | N | 0.1 | neutral | None | None | None | None | N |
L/T | 0.0638 | likely_benign | 0.0647 | benign | -0.589 | Destabilizing | None | N | 0.091 | neutral | None | None | None | None | N |
L/V | 0.0512 | likely_benign | 0.0509 | benign | -0.352 | Destabilizing | 0.004 | N | 0.163 | neutral | N | 0.407772314 | None | None | N |
L/W | 0.1129 | likely_benign | 0.1035 | benign | -0.533 | Destabilizing | 0.931 | D | 0.247 | neutral | None | None | None | None | N |
L/Y | 0.1024 | likely_benign | 0.098 | benign | -0.287 | Destabilizing | 0.076 | N | 0.319 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.