Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24932 | 75019;75020;75021 | chr2:178571338;178571337;178571336 | chr2:179436065;179436064;179436063 |
N2AB | 23291 | 70096;70097;70098 | chr2:178571338;178571337;178571336 | chr2:179436065;179436064;179436063 |
N2A | 22364 | 67315;67316;67317 | chr2:178571338;178571337;178571336 | chr2:179436065;179436064;179436063 |
N2B | 15867 | 47824;47825;47826 | chr2:178571338;178571337;178571336 | chr2:179436065;179436064;179436063 |
Novex-1 | 15992 | 48199;48200;48201 | chr2:178571338;178571337;178571336 | chr2:179436065;179436064;179436063 |
Novex-2 | 16059 | 48400;48401;48402 | chr2:178571338;178571337;178571336 | chr2:179436065;179436064;179436063 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs878982463 | None | 1.0 | D | 0.833 | 0.752 | 0.582924345863 | gnomAD-4.0.0 | 1.77929E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.33898E-05 | 0 | 0 |
P/S | rs878982463 | None | 1.0 | D | 0.858 | 0.688 | 0.561065777782 | gnomAD-4.0.0 | 6.84341E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52143E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8812 | likely_pathogenic | 0.8754 | pathogenic | -1.818 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.590419284 | None | None | N |
P/C | 0.9817 | likely_pathogenic | 0.9817 | pathogenic | -1.181 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
P/D | 0.9977 | likely_pathogenic | 0.9969 | pathogenic | -1.947 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/E | 0.9964 | likely_pathogenic | 0.9955 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/F | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -1.382 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/G | 0.9828 | likely_pathogenic | 0.9803 | pathogenic | -2.192 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
P/H | 0.9953 | likely_pathogenic | 0.9941 | pathogenic | -1.855 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
P/I | 0.9911 | likely_pathogenic | 0.9905 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/K | 0.9979 | likely_pathogenic | 0.9973 | pathogenic | -1.586 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/L | 0.9671 | likely_pathogenic | 0.964 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.64968199 | None | None | N |
P/M | 0.9939 | likely_pathogenic | 0.9926 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/N | 0.9952 | likely_pathogenic | 0.9937 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
P/Q | 0.9947 | likely_pathogenic | 0.9938 | pathogenic | -1.525 | Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.650691012 | None | None | N |
P/R | 0.9936 | likely_pathogenic | 0.9928 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.634237682 | None | None | N |
P/S | 0.9748 | likely_pathogenic | 0.9684 | pathogenic | -1.909 | Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.575853631 | None | None | N |
P/T | 0.9679 | likely_pathogenic | 0.963 | pathogenic | -1.758 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.618016517 | None | None | N |
P/V | 0.9709 | likely_pathogenic | 0.9706 | pathogenic | -1.144 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
P/W | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.663 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/Y | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -1.375 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.