Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24945 | 75058;75059;75060 | chr2:178571299;178571298;178571297 | chr2:179436026;179436025;179436024 |
N2AB | 23304 | 70135;70136;70137 | chr2:178571299;178571298;178571297 | chr2:179436026;179436025;179436024 |
N2A | 22377 | 67354;67355;67356 | chr2:178571299;178571298;178571297 | chr2:179436026;179436025;179436024 |
N2B | 15880 | 47863;47864;47865 | chr2:178571299;178571298;178571297 | chr2:179436026;179436025;179436024 |
Novex-1 | 16005 | 48238;48239;48240 | chr2:178571299;178571298;178571297 | chr2:179436026;179436025;179436024 |
Novex-2 | 16072 | 48439;48440;48441 | chr2:178571299;178571298;178571297 | chr2:179436026;179436025;179436024 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.025 | N | 0.335 | 0.028 | 0.101711395817 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 3.66354E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8305 | likely_pathogenic | 0.8666 | pathogenic | -3.207 | Highly Destabilizing | 0.845 | D | 0.577 | neutral | None | None | None | None | N |
L/C | 0.8233 | likely_pathogenic | 0.8436 | pathogenic | -2.071 | Highly Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -3.611 | Highly Destabilizing | 0.996 | D | 0.842 | deleterious | None | None | None | None | N |
L/E | 0.9961 | likely_pathogenic | 0.9965 | pathogenic | -3.301 | Highly Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | N |
L/F | 0.816 | likely_pathogenic | 0.8515 | pathogenic | -1.877 | Destabilizing | 0.975 | D | 0.651 | neutral | None | None | None | None | N |
L/G | 0.9872 | likely_pathogenic | 0.9898 | pathogenic | -3.759 | Highly Destabilizing | 0.987 | D | 0.84 | deleterious | None | None | None | None | N |
L/H | 0.993 | likely_pathogenic | 0.9939 | pathogenic | -3.234 | Highly Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
L/I | 0.099 | likely_benign | 0.11 | benign | -1.504 | Destabilizing | 0.099 | N | 0.293 | neutral | N | 0.421986831 | None | None | N |
L/K | 0.9949 | likely_pathogenic | 0.9948 | pathogenic | -2.469 | Highly Destabilizing | 0.987 | D | 0.808 | deleterious | None | None | None | None | N |
L/M | 0.311 | likely_benign | 0.3243 | benign | -1.662 | Destabilizing | 0.987 | D | 0.602 | neutral | None | None | None | None | N |
L/N | 0.9973 | likely_pathogenic | 0.9976 | pathogenic | -3.202 | Highly Destabilizing | 0.996 | D | 0.848 | deleterious | None | None | None | None | N |
L/P | 0.9952 | likely_pathogenic | 0.9961 | pathogenic | -2.07 | Highly Destabilizing | 0.994 | D | 0.847 | deleterious | D | 0.526511832 | None | None | N |
L/Q | 0.9866 | likely_pathogenic | 0.9876 | pathogenic | -2.842 | Highly Destabilizing | 0.994 | D | 0.832 | deleterious | D | 0.526511832 | None | None | N |
L/R | 0.9889 | likely_pathogenic | 0.9892 | pathogenic | -2.487 | Highly Destabilizing | 0.983 | D | 0.828 | deleterious | D | 0.526511832 | None | None | N |
L/S | 0.9864 | likely_pathogenic | 0.9894 | pathogenic | -3.645 | Highly Destabilizing | 0.987 | D | 0.797 | deleterious | None | None | None | None | N |
L/T | 0.8783 | likely_pathogenic | 0.8926 | pathogenic | -3.188 | Highly Destabilizing | 0.975 | D | 0.649 | neutral | None | None | None | None | N |
L/V | 0.0939 | likely_benign | 0.0998 | benign | -2.07 | Highly Destabilizing | 0.025 | N | 0.335 | neutral | N | 0.411110902 | None | None | N |
L/W | 0.9849 | likely_pathogenic | 0.9879 | pathogenic | -2.076 | Highly Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/Y | 0.9867 | likely_pathogenic | 0.9888 | pathogenic | -2.09 | Highly Destabilizing | 0.987 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.