Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24969 | 75130;75131;75132 | chr2:178571227;178571226;178571225 | chr2:179435954;179435953;179435952 |
N2AB | 23328 | 70207;70208;70209 | chr2:178571227;178571226;178571225 | chr2:179435954;179435953;179435952 |
N2A | 22401 | 67426;67427;67428 | chr2:178571227;178571226;178571225 | chr2:179435954;179435953;179435952 |
N2B | 15904 | 47935;47936;47937 | chr2:178571227;178571226;178571225 | chr2:179435954;179435953;179435952 |
Novex-1 | 16029 | 48310;48311;48312 | chr2:178571227;178571226;178571225 | chr2:179435954;179435953;179435952 |
Novex-2 | 16096 | 48511;48512;48513 | chr2:178571227;178571226;178571225 | chr2:179435954;179435953;179435952 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1708070929 | None | 0.988 | N | 0.675 | 0.254 | 0.158396225186 | gnomAD-4.0.0 | 3.18353E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88267E-05 | 0 | 0 | 0 | 3.02517E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5823 | likely_pathogenic | 0.6117 | pathogenic | -0.389 | Destabilizing | 0.968 | D | 0.616 | neutral | None | None | None | None | N |
K/C | 0.7011 | likely_pathogenic | 0.7138 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
K/D | 0.8992 | likely_pathogenic | 0.9095 | pathogenic | 0.269 | Stabilizing | 0.995 | D | 0.764 | deleterious | None | None | None | None | N |
K/E | 0.4297 | ambiguous | 0.4697 | ambiguous | 0.318 | Stabilizing | 0.958 | D | 0.528 | neutral | N | 0.51567057 | None | None | N |
K/F | 0.8436 | likely_pathogenic | 0.8629 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/G | 0.7657 | likely_pathogenic | 0.7897 | pathogenic | -0.654 | Destabilizing | 0.991 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/H | 0.3583 | ambiguous | 0.3642 | ambiguous | -0.951 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/I | 0.412 | ambiguous | 0.4315 | ambiguous | 0.252 | Stabilizing | 0.995 | D | 0.752 | deleterious | None | None | None | None | N |
K/L | 0.4605 | ambiguous | 0.4757 | ambiguous | 0.252 | Stabilizing | 0.991 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/M | 0.3439 | ambiguous | 0.3568 | ambiguous | 0.131 | Stabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.478370224 | None | None | N |
K/N | 0.7412 | likely_pathogenic | 0.768 | pathogenic | -0.052 | Destabilizing | 0.988 | D | 0.675 | neutral | N | 0.46625345 | None | None | N |
K/P | 0.8414 | likely_pathogenic | 0.8605 | pathogenic | 0.068 | Stabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
K/Q | 0.181 | likely_benign | 0.1884 | benign | -0.207 | Destabilizing | 0.988 | D | 0.649 | neutral | N | 0.468886796 | None | None | N |
K/R | 0.0745 | likely_benign | 0.0745 | benign | -0.23 | Destabilizing | 0.142 | N | 0.343 | neutral | N | 0.463743027 | None | None | N |
K/S | 0.6725 | likely_pathogenic | 0.6952 | pathogenic | -0.717 | Destabilizing | 0.968 | D | 0.599 | neutral | None | None | None | None | N |
K/T | 0.2965 | likely_benign | 0.2959 | benign | -0.485 | Destabilizing | 0.988 | D | 0.753 | deleterious | N | 0.423352268 | None | None | N |
K/V | 0.4039 | ambiguous | 0.4246 | ambiguous | 0.068 | Stabilizing | 0.995 | D | 0.756 | deleterious | None | None | None | None | N |
K/W | 0.8099 | likely_pathogenic | 0.824 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
K/Y | 0.7531 | likely_pathogenic | 0.7693 | pathogenic | 0.004 | Stabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.